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SCNpilot_cont_500_bf_scaffold_17104_3

Organism: SCNPILOT_CONT_300_BF_Rhizobiales_66_14

partial RP 27 / 55 BSCG 28 / 51 MC: 3 ASCG 10 / 38
Location: 1841..2674

Top 3 Functional Annotations

Value Algorithm Source
Shikimate dehydrogenase (NADP(+)) {ECO:0000256|HAMAP-Rule:MF_00222, ECO:0000256|SAAS:SAAS00228653}; Short=SDH {ECO:0000256|HAMAP-Rule:MF_00222};; EC=1.1.1.25 {ECO:0000256|HAMAP-Rule:MF_00222, ECO:0000256|SAAS:SAAS00216361};; TaxID=1502724 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. LC5.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 73.9
  • Coverage: 272.0
  • Bit_score: 399
  • Evalue 4.80e-108
shikimate 5-dehydrogenase; K00014 shikimate dehydrogenase [EC:1.1.1.25] similarity KEGG
DB: KEGG
  • Identity: 65.5
  • Coverage: 275.0
  • Bit_score: 334
  • Evalue 2.50e-89
  • rbh
Shikimate dehydrogenase n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R7R0_PELHB similarity UNIREF
DB: UNIREF100
  • Identity: 65.5
  • Coverage: 275.0
  • Bit_score: 334
  • Evalue 7.90e-89
  • rbh

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Taxonomy

Devosia sp. LC5 → Devosia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 834
GTGATTCACGTGAAAAAAGCCTTCGTCATCGGCCACCCGATCAAGCATTCCCGCTCGCCGCTGATCCATGGCAGCTGGCTGGCCGAGCACGGCATCGACGGCAGCTACGAGGCGATCGATGTCGCCCCCGATGCCTTGCCCGCCTTCATCGAGCGGTTGCGGCAGGGCGAGTTCGTCGGCGGCAATGTCACCATCCCGCACAAGGAAGCAGTGTTCGCCCTCTGCGACAGCGTCGATCCGCTGGCGCGGACCATCGGCGCGGCCAATACCCTGGTGCGCCAGCCCGATGGCCGAATCCATGGGTTCAACACCGACTATATGGGCTTTCTCGGCAATCTCGACCAGAACGCGCCAGGCTGGGCTGCGGGTCTCGGGCGAGCCGTCGTGCTCGGCGCGGGCGGTGCGGCGCGAGCCATCCTCGTGGCGCTGCGCGAGCAGGGGGTGCCCGAGATCGTGCTGCTGAACCGCACACCGGAAAAGGCCGCGGCGTTGGCGCGGGAGATCGGCGGCCCGTTCATTGCCGGCGGTCTCACCGATTACGCCGATTACGCCGCGGGCGCCGGCCTCCTGGTCAACACCACTTCGATCGGTATGCACGACACCCGCTTCGAGGCCCTCGATCTCGGGTTGCTGCCCGGCACCGCCTTGGTCACCGATATCGTCTACGTGCCGCTGACCACCCCGCTGCTCGCCGACGCCCGGGCCCTCGGGCTTCGCACGGTCGATGGTCTGGGCATGCTGCTGCATCAGGCGGTTCCGGGCTTTGCGGCCTGGTTCGGAGTGCGCCCGGAAGTCACTTCGGCGCTGCGGGCAAAGGTCGAGGCGACGCTCTGA
PROTEIN sequence
Length: 278
VIHVKKAFVIGHPIKHSRSPLIHGSWLAEHGIDGSYEAIDVAPDALPAFIERLRQGEFVGGNVTIPHKEAVFALCDSVDPLARTIGAANTLVRQPDGRIHGFNTDYMGFLGNLDQNAPGWAAGLGRAVVLGAGGAARAILVALREQGVPEIVLLNRTPEKAAALAREIGGPFIAGGLTDYADYAAGAGLLVNTTSIGMHDTRFEALDLGLLPGTALVTDIVYVPLTTPLLADARALGLRTVDGLGMLLHQAVPGFAAWFGVRPEVTSALRAKVEATL*