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SCNpilot_cont_500_bf_scaffold_18404_1

Organism: SCNPILOT_CONT_300_BF_Rhizobiales_66_14

partial RP 27 / 55 BSCG 28 / 51 MC: 3 ASCG 10 / 38
Location: comp(3..554)

Top 3 Functional Annotations

Value Algorithm Source
Ribonuclease R {ECO:0000256|HAMAP-Rule:MF_01895}; Short=RNase R {ECO:0000256|HAMAP-Rule:MF_01895};; EC=3.1.13.1 {ECO:0000256|HAMAP-Rule:MF_01895};; TaxID=1502724 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. LC5.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 73.1
  • Coverage: 182.0
  • Bit_score: 270
  • Evalue 2.20e-69
3'-to-5' exoribonuclease RNase R; K12573 ribonuclease R [EC:3.1.-.-] similarity KEGG
DB: KEGG
  • Identity: 62.1
  • Coverage: 190.0
  • Bit_score: 238
  • Evalue 1.60e-60
Ribonuclease R n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RBC6_PELHB similarity UNIREF
DB: UNIREF100
  • Identity: 62.1
  • Coverage: 190.0
  • Bit_score: 238
  • Evalue 5.10e-60

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Taxonomy

Devosia sp. LC5 → Devosia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 552
ATGGCGAAACCGCCAAAAACCAAGACAACACCCAAAGGCCCACGGCAGTTTGCCGTCGGCCAGCTCCCTTCGCGGGAGGCCATCCTCGAAGCGATGGCGCAGCAGCCGACCCTCGATGGCAAGCGCGACCTGGCGCGCCATTTCGGCATCCACGGCGACATGCGCACCCCGTTCAAGGTGCTGCTCAAGCAGATGGAGGGTGAGGGCTTCATTGCCCGCACCCGCAAGCAGATCCGGCCGACCGCCGCGCTGCCCGCGGTCACCGTCCTCGACATCCCCGCGGATGCCGACCCCGACAATCTCCACGCCTTCCCGGCGCAATGGAACGACGACGAGGGCGAGCGCCCGCGCGTTGCGGTGAAGCAGCCGAAGGACGCCCGCGTGGCCCCGGCGCCCGGCGATCGCATTCTGGCGCGGATCAGCGCCGGCGACGGCGAACTGCCCGATTACACCGCCCGGGCGATGAATATCCTCGACAAGCCGCGCCGCGGCCAGATCGGCATCGTCCGTATGGACGAGGACGGAGCACGGCTGATCCCGGTCGATCGCAAG
PROTEIN sequence
Length: 184
MAKPPKTKTTPKGPRQFAVGQLPSREAILEAMAQQPTLDGKRDLARHFGIHGDMRTPFKVLLKQMEGEGFIARTRKQIRPTAALPAVTVLDIPADADPDNLHAFPAQWNDDEGERPRVAVKQPKDARVAPAPGDRILARISAGDGELPDYTARAMNILDKPRRGQIGIVRMDEDGARLIPVDRK