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SCNpilot_cont_500_bf_scaffold_21036_4

Organism: SCNPILOT_CONT_300_BF_Rhizobiales_66_14

partial RP 27 / 55 BSCG 28 / 51 MC: 3 ASCG 10 / 38
Location: comp(1656..2210)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor n=1 Tax=Ochrobactrum anthropi (strain ATCC 49188 / DSM 6882 / NCTC 12168) RepID=A6WYB1_OCHA4 similarity UNIREF
DB: UNIREF100
  • Identity: 82.6
  • Coverage: 172.0
  • Bit_score: 297
  • Evalue 7.10e-78
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000716}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 85.5
  • Coverage: 179.0
  • Bit_score: 313
  • Evalue 1.80e-82
RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily similarity KEGG
DB: KEGG
  • Identity: 82.6
  • Coverage: 172.0
  • Bit_score: 297
  • Evalue 2.20e-78

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Taxonomy

Devosia riboflavina → Devosia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 555
ATGGAAGCCGAAAAGCCGAGCTTCAAGCGCGAGCTGCTGTCCACTTTGCCCAGCCTCCGGGCGTTCGCGGTGTCGCTTTCAGGGCGCCACGACAAGGCGGACGACCTGGTACAGGACACCGTCATGAAGGCCTGGGCGAAGCAGGAAAGCTTCGAGATGGGCACCAACATGAAGGCGTGGCTGTTCACCATCCTTCGCAATGAGTTCTACAGCCAGATGCGCAAGCGCGGCCGTGAGGTGCAGGACACCGACGGCGCCTTCACCGAGCGCATGGCCGTGCACCCGGCGCAATACGGGATCATGGACCTCAGCGATTTCAAGGCGGCGCTCGACAAACTGCCCGACGACCAGCGCGAAGCGATCATCCTGATCGGCGCCTCCGGCTTTTCCTACGAAGAGGCGGCCGAGATCTGCAAATGCGCGGTCGGCACCATGAAGAGCCGCGTCAGCCGCGCCCGCAGCAAGCTGCAGGAAGTGCTCAAGGTGACGGGCGAGGGCGATTACGGGCCGGATTCGGTGTCGGCGCAGGTGACGACGCTGCCGCGCTTTACCTGA
PROTEIN sequence
Length: 185
MEAEKPSFKRELLSTLPSLRAFAVSLSGRHDKADDLVQDTVMKAWAKQESFEMGTNMKAWLFTILRNEFYSQMRKRGREVQDTDGAFTERMAVHPAQYGIMDLSDFKAALDKLPDDQREAIILIGASGFSYEEAAEICKCAVGTMKSRVSRARSKLQEVLKVTGEGDYGPDSVSAQVTTLPRFT*