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SCNpilot_cont_500_bf_scaffold_23379_1

Organism: SCNPILOT_CONT_300_BF_Rhizobiales_66_14

partial RP 27 / 55 BSCG 28 / 51 MC: 3 ASCG 10 / 38
Location: comp(334..1221)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor RpoH n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R951_PELHB similarity UNIREF
DB: UNIREF100
  • Identity: 83.8
  • Coverage: 290.0
  • Bit_score: 496
  • Evalue 2.20e-137
RNA polymerase sigma factor RpoH {ECO:0000256|HAMAP-Rule:MF_00961}; RNA polymerase sigma-32 factor {ECO:0000256|HAMAP-Rule:MF_00961}; TaxID=361041 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia soli.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 92.4
  • Coverage: 288.0
  • Bit_score: 534
  • Evalue 1.00e-148
RNA polymerase sigma factor RpoH; K03089 RNA polymerase sigma-32 factor similarity KEGG
DB: KEGG
  • Identity: 83.8
  • Coverage: 290.0
  • Bit_score: 496
  • Evalue 6.90e-138

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Taxonomy

Devosia soli → Devosia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 888
ATGGCCCAGACCAATCTGCCAATTCTTTCGGCTGAGGGTGGACTCAGCCGCTATCTCCAGGAAATCCGCAAGTTTCCGATGCTGGAGCCTGACGAGGAATATATGCTCGCCAAGCGCTACAAGGAGCATCAGGATCCGGGCGCTGCCCAGAAGCTCATCACCTCGCATCTGCGTCTCGTGGCCAAGATCGCCATGGGCTATCGCGGCTACGGCTTGCCCATCTCCGAGGTCATCTCGGAAGGCAATGTCGGCCTGATGCATGCGGTCAAGCGCTTCGAGCCGGAAAAGGGCTTCCGCCTCGCGACCTACGCGATGTGGTGGATCCGCGCCGCCATTCAGGAATACGTGCTGCGCTCGTGGTCGCTGGTGAAGATCGGCACCACCGCGGCGCAGAAGCGGCTGTTCTTCAACCTGCGCAAGATCAAGGGGCAGATCGCCGCCCTCGATGACGGCAACCTCCACCCCGACCAGATCAAGCAGATCGCGACGACGCTGCACGTCACCGAAAGCGACGTGGTGTCGATGAACCAGCGCCTCTCGGGCGATGCGTCGCTCAACGCCCCGATGCGCGCCGACGAAGGCGCCTCGGAATGGCAGGATTGGCTGGTCGACGATACCCCGGACCAGGAGACCACCCTCGGCGAGACCGAGGAATTCTCCGAGCGCATGGGCCTGCTCACCAACGCGATGGGCGATCTCAACGAGCGCGAGAAGGCGATCTTCCAGGCCCGCCGCCTGCGCGACGAGCCGGCGACGCTCGAAGAGCTGGCGCAGGAATACAATGTCAGCCGCGAGCGTATCCGGCAGATCGAGGTCCGCGCTTTCGAAAAAGTGCAGGAAGCCGTGCAGAAGGCAGCTCACGCCAAGTCGCGCGAAGCCAGCCTCTGA
PROTEIN sequence
Length: 296
MAQTNLPILSAEGGLSRYLQEIRKFPMLEPDEEYMLAKRYKEHQDPGAAQKLITSHLRLVAKIAMGYRGYGLPISEVISEGNVGLMHAVKRFEPEKGFRLATYAMWWIRAAIQEYVLRSWSLVKIGTTAAQKRLFFNLRKIKGQIAALDDGNLHPDQIKQIATTLHVTESDVVSMNQRLSGDASLNAPMRADEGASEWQDWLVDDTPDQETTLGETEEFSERMGLLTNAMGDLNEREKAIFQARRLRDEPATLEELAQEYNVSRERIRQIEVRAFEKVQEAVQKAAHAKSREASL*