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SCNpilot_cont_500_bf_scaffold_23379_2

Organism: SCNPILOT_CONT_300_BF_Rhizobiales_66_14

partial RP 27 / 55 BSCG 28 / 51 MC: 3 ASCG 10 / 38
Location: comp(1696..2379)

Top 3 Functional Annotations

Value Algorithm Source
Pseudouridine synthase {ECO:0000256|RuleBase:RU362028}; EC=5.4.99.- {ECO:0000256|RuleBase:RU362028};; TaxID=361041 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia soli.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 79.3
  • Coverage: 227.0
  • Bit_score: 381
  • Evalue 6.50e-103
ribosomal large subunit pseudouridine synthase D; K06180 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23] similarity KEGG
DB: KEGG
  • Identity: 70.3
  • Coverage: 222.0
  • Bit_score: 323
  • Evalue 6.10e-86
Pseudouridine synthase n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R950_PELHB similarity UNIREF
DB: UNIREF100
  • Identity: 70.3
  • Coverage: 222.0
  • Bit_score: 323
  • Evalue 1.90e-85

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Taxonomy

Devosia soli → Devosia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 684
GGCAACTATACCGGGACGCTGGTCAACGCCCTGCTCTACCATTGCGGCGACAGCCTCAAGCGCATCGGCGGGGTCAAGCGCCCAGGGATCGTCCACCGCCTCGACAAGGACACCTCGGGCGTCATGGTCGCCGCCAAGACCGAGCAGGCGCATAATCACCTTGCCGCGCAGTTCGCCGACCACGGCCGTACGGGGCCCCTCCACCGCGCCTACTTCGCCTGGTGCTGGGGCCGCACCCAGCAGGCCTCGGGCACGGTCGAGGCGCCGCTCGGCCGCGATCCGGCCAACCGGCTGAAGCAGGCGGTGCGCAAGGATGGTCGCGGGGCCATCACCCATTACTGGGTCGAGGCCCGTTTCGGCGATGACGGCTGGGACATCACCCGCATCCGCTGCGAGCTCGAAACCGGCAGGACCCACCAGATCCGCGTCCACATGGCCCATATCGGCCACCCGCTGGTTGCCGACATGGTCTACGGCTCCGGCTTCGCCACCAAGGTCAACCGGCTGCCCGATGCCGCGAGGACCGCCGTTGCGGCGCTCGGCCGCCAGGCGCTGCACGCCGCCGAGCTCGGCTTCGAGCACCCGGTGACCGGCGAGGAAATGCAGTTCGAAGCGCCACTGCCGCCCGACCTCGAAGCGCTCGAAGCGGCGATCGAACCGTTCGACCGGGCGTTCGCGCGGTAA
PROTEIN sequence
Length: 228
GNYTGTLVNALLYHCGDSLKRIGGVKRPGIVHRLDKDTSGVMVAAKTEQAHNHLAAQFADHGRTGPLHRAYFAWCWGRTQQASGTVEAPLGRDPANRLKQAVRKDGRGAITHYWVEARFGDDGWDITRIRCELETGRTHQIRVHMAHIGHPLVADMVYGSGFATKVNRLPDAARTAVAALGRQALHAAELGFEHPVTGEEMQFEAPLPPDLEALEAAIEPFDRAFAR*