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SCNpilot_cont_500_bf_scaffold_24254_2

Organism: SCNPILOT_CONT_300_BF_Rhizobiales_66_14

partial RP 27 / 55 BSCG 28 / 51 MC: 3 ASCG 10 / 38
Location: 977..1870

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, LysR family n=1 Tax=Ruegeria pomeroyi (strain ATCC 700808 / DSM 15171 / DSS-3) RepID=Q5LX11_RUEPO similarity UNIREF
DB: UNIREF100
  • Identity: 45.8
  • Coverage: 286.0
  • Bit_score: 256
  • Evalue 3.80e-65
Transcriptional regulator, LysR family {ECO:0000313|EMBL:CDP51793.1}; TaxID=1228055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. DDB001.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 71.9
  • Coverage: 295.0
  • Bit_score: 412
  • Evalue 5.80e-112
LysR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 45.8
  • Coverage: 286.0
  • Bit_score: 256
  • Evalue 1.20e-65

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Taxonomy

Devosia sp. DDB001 → Devosia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 894
ATGCCTGATCCCGATTGGTCGCTGTGGCGCAGCTTTGGCGCCGTCGTCGAACACGGCTCGCTTTCGGCCGCTGCGCGGGCTCTCGGCTTGAGCCAGCCGACGCTTGGCCGTCATGTCGAGGCGCTCGAACAGGCCCTGGGGATGAGCCTGTTCGAACGCACGCTCACTGGCTTCCACGCCACCGATACCGCGCTGAAGCTCTACGAACCGGTGCTGGCGGCGCAGCAGGCGCTGGCCGAAGCGGCATTGATCGCCGAGGGCGCGAGCGCCGCGCTGACCGGTTCGGTCCGCATCACCTCGAGCACGGTGATGTGCCACTATGTCCTGCCCGCCTTCCTCAACGACTTGCGCCAGAGCTTCCCGCAGGTGGCGATCGAGCTGGTGCCATCCGACTCCGCCGAGAACCTGCTGCTGCGCGAAGCCGATATCGCCGTGCGCATGTTTCGCCCCACCCAGCTCGAGCTGATCACGAGGAAACTCGGCGAGAGCCCGATCGTCACCTGTGCTCACGAAAGCTACATTGCCCGGCGCGGGCGGCCGGAACGACCCGAGCAACTGGCCGAGCACGACCTGATCGGCTTCGATCGCTCCGAGCTGCTGATCGGTGCGGCCCGGCGCATGGGGTTCGAGCTCAAGCGCAGCGATTTCATCGTCCGCACCGACAGCCAGACCAATGCCTGGGAGCTGATCAAGGCCGGTCTCGGGGTCGGCTTCGCCCAACAGCTGCTGGTGGCCGAGACGCGCGGCATGGTGCCGCTATTGCCCGATTTCCGCCCGCCGCCCCTGGAAGTGTGGTTGACCACGCATCGCGAACTGTTCACCAGCCGTCGCATTCGTGCCATCTATGACCGACTGGGCGAGGGCCTCAGCCGCTTCCTCGCGAGGACATTATGA
PROTEIN sequence
Length: 298
MPDPDWSLWRSFGAVVEHGSLSAAARALGLSQPTLGRHVEALEQALGMSLFERTLTGFHATDTALKLYEPVLAAQQALAEAALIAEGASAALTGSVRITSSTVMCHYVLPAFLNDLRQSFPQVAIELVPSDSAENLLLREADIAVRMFRPTQLELITRKLGESPIVTCAHESYIARRGRPERPEQLAEHDLIGFDRSELLIGAARRMGFELKRSDFIVRTDSQTNAWELIKAGLGVGFAQQLLVAETRGMVPLLPDFRPPPLEVWLTTHRELFTSRRIRAIYDRLGEGLSRFLARTL*