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SCNpilot_cont_500_bf_scaffold_26842_1

Organism: SCNPILOT_CONT_300_BF_Rhizobiales_66_14

partial RP 27 / 55 BSCG 28 / 51 MC: 3 ASCG 10 / 38
Location: 234..1499

Top 3 Functional Annotations

Value Algorithm Source
Transcription termination factor Rho {ECO:0000256|HAMAP-Rule:MF_01884}; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_01884};; ATP-dependent helicase Rho {ECO:0000256|HAMAP-Rule:MF_01884}; TaxID=443610 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia geojensis.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 95.7
  • Coverage: 421.0
  • Bit_score: 797
  • Evalue 9.20e-228
Transcription termination factor Rho n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R7Q6_PELHB similarity UNIREF
DB: UNIREF100
  • Identity: 92.6
  • Coverage: 421.0
  • Bit_score: 771
  • Evalue 5.00e-220
  • rbh
transcription termination factor Rho; K03628 transcription termination factor Rho similarity KEGG
DB: KEGG
  • Identity: 92.6
  • Coverage: 421.0
  • Bit_score: 771
  • Evalue 1.60e-220
  • rbh

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Taxonomy

Devosia geojensis → Devosia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1266
ATGGAAAATATGAAGCTCAGCGAGCTCAAGGCCAAGACGCCTGCCGAATTGCTTGAATTCGCCGAGACTTACGAGGTCGAGAATGCCTCGACCATGCGTAAGCAGGAACTGATGTTCGCCATCCTCAAGGAGCTGGCGGCGCGCGAAGTCGACATCACCGGCGAAGGGGTGGTCGAGGTGCTGCCGGATGGCTTCGGCTTCCTGCGCTCGCCGGACGCCAACTACCTGCCCGGCCCCGACGACATCTACGTCTCCCCCTCGCAGATCCGCCGCTTCTCGCTGCGGACCGGCGACACGGTCGAAGGCCAGATCCGGTCTCCCAAGGAAGGCGAGCGCTACTTCGCGCTGCTGAAGGTCAACACCATCAATTTCGAGGACCCCGAGAAGGTCCGCCACAAGATCAATTTCGACAACCTGACGCCGCTCTACCCCGATGAGCGGCTGCGCCTCGAGCTGCCGGACCCGACGGTCAAGGACAAGAGCGCCCGGATCATGGATCTGGTGGCGCCGCTCGGCAAAGGTCAGCGTGCCCTTATTGTTGCGCCGCCGCGTACTGGTAAGACCGTACTGTTGCAGAATATTGCACAGTCGATCGCTATCAATCATCCCGAGTGCTACCTGATCGTGCTGCTGATCGACGAGCGGCCGGAGGAAGTCACCGACATGCAGCGCTCGGTGCGCGGCGAGGTGATCTCCTCGACCTTCGACGAGCCGGCGTCGCGCCACGTCCAGGTCGCCGAGATGGTGATCGAGAAGGCGAAACGCCTCGTCGAACACAAGCGCGATGTGGTGATCCTGCTCGATTCGATCACCCGCCTCGGCCGTGCCTACAACACCGTGGTGCCGAGCTCGGGCAAGGTGCTGACCGGCGGTGTGGACGCCAACGCACTGCAGCGCCCCAAGCGGTTCTTCGGTGCCGCCCGCAACATCGAAGACGGCGGCTCGCTCACCATCATCTCGACGGCGCTGATCGATACCGGCAGCCGCATGGATGAAGTGATCTTCGAAGAGTTCAAGGGCACGGGTAACTCGGAAATCGTCCTCGATCGCAAGGTCTCGGACAAGCGGGTGTTCCCGGCGATGGATGTCACCAAGTCTGGCACCCGCAAGGAAGAGCTGCTGGTCGAGCCGGATATCTTGAGGAAGATGTACGTGCTGCGCCGCATCCTCAACCCGATGGGCACGGTCGACGCCATGGAGTTCCTGATGGACAAGATCCGTCAGACCAAGACGAACTCCGATTTCTTCGACTCGATGAACACCTAA
PROTEIN sequence
Length: 422
MENMKLSELKAKTPAELLEFAETYEVENASTMRKQELMFAILKELAAREVDITGEGVVEVLPDGFGFLRSPDANYLPGPDDIYVSPSQIRRFSLRTGDTVEGQIRSPKEGERYFALLKVNTINFEDPEKVRHKINFDNLTPLYPDERLRLELPDPTVKDKSARIMDLVAPLGKGQRALIVAPPRTGKTVLLQNIAQSIAINHPECYLIVLLIDERPEEVTDMQRSVRGEVISSTFDEPASRHVQVAEMVIEKAKRLVEHKRDVVILLDSITRLGRAYNTVVPSSGKVLTGGVDANALQRPKRFFGAARNIEDGGSLTIISTALIDTGSRMDEVIFEEFKGTGNSEIVLDRKVSDKRVFPAMDVTKSGTRKEELLVEPDILRKMYVLRRILNPMGTVDAMEFLMDKIRQTKTNSDFFDSMNT*