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SCNpilot_cont_500_bf_scaffold_30239_2

Organism: SCNPILOT_CONT_300_BF_Rhizobiales_66_14

partial RP 27 / 55 BSCG 28 / 51 MC: 3 ASCG 10 / 38
Location: comp(684..1502)

Top 3 Functional Annotations

Value Algorithm Source
Putative transmembrane anti-sigma factor n=1 Tax=Mesorhizobium sp. (strain BNC1) RepID=Q11M25_MESSB similarity UNIREF
DB: UNIREF100
  • Identity: 48.2
  • Coverage: 255.0
  • Bit_score: 227
  • Evalue 2.30e-56
Transmembrane regulator protein PrtR {ECO:0000313|EMBL:CDP50998.1}; TaxID=1228055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. DDB001.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 57.4
  • Coverage: 270.0
  • Bit_score: 291
  • Evalue 1.10e-75
putative transmembrane anti-sigma factor similarity KEGG
DB: KEGG
  • Identity: 48.2
  • Coverage: 255.0
  • Bit_score: 227
  • Evalue 7.20e-57

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Taxonomy

Devosia sp. DDB001 → Devosia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 819
ATGACGAACCTCGTCCCCATCTCCGAAACCGACCTGCATGCCTTTGTCGACGGCAAGCTGACGCCCGAGCGTCGCACCGAAGTCGAGACCTGGCTGGCGGCGCATCCCGACAAGGCGGCCGAAGTGGCCGGTTGGCAGCGCCAGAACGAAGCGCTTGCCGCGCTGTTCGGCGGCACCGCCGACGAGACCGTGCCGTCGCGGCTCGATCCGCATCTCATCGCCCGCTCTCCGGCCGCGACGCGCCACCCGGCGCGCTGGCAGCTGGCGGCGGCGGCAGTGGTGATGCTGGCGCTCGGTGGCGCCCTGGGCTGGGCCGGACGCGATTACCTCAAGCCCAGCGAGCGGCAGGAACTGATCGCTTCGGCGGTCAGCGCCCACGCCCTCTACGTAAAGGAGAACCGCCACGCCGTCGAGGTCGCGGCCGCCGACAAGGACCACCTGGTGTCCTGGCTGTCGAACCGGGTCGAACGCCCGATCACCCCACCCGACCTGGCGCCCGACGGCTTCACCCTGGTAGGGGGCCGGCTGCTGCCCGGCTACGGTGAGCAACCCACTGGCCCGGCCGCGCAGCTGATGTACGAGAACGCCGCGCAGGAGCGGGTGACCGTCTACATTACCGCGGCGCTGCCCGATCGGCGGACCGACCGGGAATTCACGGCGCGCGACAATCTCGACGCCTTCTACTGGGCCAACGACAAGATCACCTGCACCGTGGTCGGCGACCTGCCTGAAGCCCAGATGCAGGCCGTGGCCAAGAAGGTCTACCAGCAGCTCACCTGGCGCCCCGACGGGGGAACCGGCGCGGCCTGGGGCACCTGA
PROTEIN sequence
Length: 273
MTNLVPISETDLHAFVDGKLTPERRTEVETWLAAHPDKAAEVAGWQRQNEALAALFGGTADETVPSRLDPHLIARSPAATRHPARWQLAAAAVVMLALGGALGWAGRDYLKPSERQELIASAVSAHALYVKENRHAVEVAAADKDHLVSWLSNRVERPITPPDLAPDGFTLVGGRLLPGYGEQPTGPAAQLMYENAAQERVTVYITAALPDRRTDREFTARDNLDAFYWANDKITCTVVGDLPEAQMQAVAKKVYQQLTWRPDGGTGAAWGT*