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SCNpilot_cont_500_bf_scaffold_29960_2

Organism: SCNPILOT_CONT_300_BF_Rhizobiales_66_14

partial RP 27 / 55 BSCG 28 / 51 MC: 3 ASCG 10 / 38
Location: comp(1146..1505)

Top 3 Functional Annotations

Value Algorithm Source
Two-component response regulator protein n=2 Tax=Rhizobium/Agrobacterium group RepID=B9JMS6_AGRRK similarity UNIREF
DB: UNIREF100
  • Identity: 49.6
  • Coverage: 113.0
  • Bit_score: 119
  • Evalue 2.90e-24
two-component response regulator protein similarity KEGG
DB: KEGG
  • Identity: 49.6
  • Coverage: 113.0
  • Bit_score: 119
  • Evalue 9.20e-25
Transcriptional regulator {ECO:0000313|EMBL:KEA03620.1}; TaxID=359 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Agrobacterium rhizogenes.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 49.6
  • Coverage: 113.0
  • Bit_score: 119
  • Evalue 4.10e-24

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Taxonomy

Agrobacterium rhizogenes → Agrobacterium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 360
GTGGCGCACGTAACCATCCTGGTCGTCGATGACGAGCCGCTTATCCGTCTGGATATAGCCTACATGCTTGAGGATCTGGGCTACCAGACGATCGAGGCGTCAAACGCCGACGAGGCGATGCAACTGCTGGCCGAGCTGCCTCACATCGCGGCCATCGTCACCGACGTCGACATGCCCGGAACGATGGATGGTCGCCAGCTTGCAATGACCGTGAGCAATCGCTGGGCGCCATGCAAGCTGATTGTGATGTCGGGGCACCGCATGCTGACGGCCCCGGATCTGCCATCGGGAGCAGTCTTCATTTCCAAGCCGGTGCCGGCACGACAGTTGGCCAGCGCACTGGCCGGCTTCGGCGTCTGA
PROTEIN sequence
Length: 120
VAHVTILVVDDEPLIRLDIAYMLEDLGYQTIEASNADEAMQLLAELPHIAAIVTDVDMPGTMDGRQLAMTVSNRWAPCKLIVMSGHRMLTAPDLPSGAVFISKPVPARQLASALAGFGV*