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SCNpilot_cont_500_bf_scaffold_31413_3

Organism: SCNPILOT_CONT_300_BF_Rhizobiales_66_14

partial RP 27 / 55 BSCG 28 / 51 MC: 3 ASCG 10 / 38
Location: 1197..1895

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Short=RNAP subunit beta {ECO:0000256|HAMAP-Rule:MF_01321};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01321};; RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Transcriptase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; TaxID=443610 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia geojensis.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 97.4
  • Coverage: 231.0
  • Bit_score: 452
  • Evalue 4.00e-124
DNA-directed RNA polymerase subunit beta; K03043 DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] similarity KEGG
DB: KEGG
  • Identity: 94.8
  • Coverage: 232.0
  • Bit_score: 446
  • Evalue 4.90e-123
DNA-directed RNA polymerase subunit beta n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RC44_PELHB similarity UNIREF
DB: UNIREF100
  • Identity: 94.8
  • Coverage: 232.0
  • Bit_score: 446
  • Evalue 1.60e-122

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Taxonomy

Devosia geojensis → Devosia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 699
ATGGCTACCACGTTCAACGGCCGCCGCAAGGTACGCAAGTCTTTCGGCAGCATTCGCGAAGTCACGGAGATGCCCAATCTGATCGAGGTCCAGAAGGCCTCCTATGATCAGTTCCTCCTCGTGGACGAGCCCAAGGGCGGGCGTCCCGATGAGGGGCTTCAATCCGTTTTCCGGTCGGTGTTTCCGATCACCGACTTTTCCAACACCGCTTCCCTCGAGTTCGTGAAGTACGAGTTCGAGCAGCCGAAGTATGACGTCGACGAGTGCCGTCAGCGCGACATGACGTTCGCAGCGCCGCTCAAGGTCACGCTTCGCCTGATCGTGTTCGAAGTTGATGAAGAGACCGGCGCCCGCTCCGTCAAGGACATCAAGGAGCAGGACGTCTATATGGGCGACATGCCGTTCATGACCATGAACGGCACCTTCATCGTCAACGGCACCGAGCGCGTCATCGCCTCGCAGATGCACCGTTCGCCCGGCGTGTTCTTCGATCACGACAAGGGCAAGACCCACTCCTCGGGCAAGCTGCTCTTCGCCGCGCGCATCATCCCGTATCGCGGTTCCTGGCTCGACATCGAGTTCGACGCCAAGGACATCGTGTTCGCCCGTATCGACCGTCGCCGCAAGATTCCGGTGACCTCGCTGCTCAAGGCGCTCGGCATGGATGCCGAGGAAATTCTCGCGACCTATTACGATACG
PROTEIN sequence
Length: 233
MATTFNGRRKVRKSFGSIREVTEMPNLIEVQKASYDQFLLVDEPKGGRPDEGLQSVFRSVFPITDFSNTASLEFVKYEFEQPKYDVDECRQRDMTFAAPLKVTLRLIVFEVDEETGARSVKDIKEQDVYMGDMPFMTMNGTFIVNGTERVIASQMHRSPGVFFDHDKGKTHSSGKLLFAARIIPYRGSWLDIEFDAKDIVFARIDRRRKIPVTSLLKALGMDAEEILATYYDT