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SCNpilot_cont_500_bf_scaffold_36016_1

Organism: SCNPILOT_CONT_300_BF_Rhizobiales_66_14

partial RP 27 / 55 BSCG 28 / 51 MC: 3 ASCG 10 / 38
Location: comp(90..1337)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma70 factor n=1 Tax=Rhizobium loti RepID=UPI00036CC64A similarity UNIREF
DB: UNIREF100
  • Identity: 62.7
  • Coverage: 410.0
  • Bit_score: 483
  • Evalue 2.10e-133
RNA polymerase sigma-70 factor, ECF subfamily {ECO:0000313|EMBL:CDP50210.1}; TaxID=1228055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. DDB001.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 79.8
  • Coverage: 410.0
  • Bit_score: 636
  • Evalue 2.00e-179
ECF family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily similarity KEGG
DB: KEGG
  • Identity: 62.7
  • Coverage: 408.0
  • Bit_score: 480
  • Evalue 4.20e-133

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Taxonomy

Devosia sp. DDB001 → Devosia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1248
ATGGTGCGGGGCGAGAGCAACGAGGCCGCCCGCGCCGCCGAACGGGTGGCCCGCGAAAGCTATGGCCGCCTCGTTGCCTTCCTCGCTGCCCGCACCCGCGATGTCGCCGGTGCCGAGGACGCGCTGGCCGAGGCGTTTGCCGCGGCTCTGCACACCTGGCCGACCGAGGGTGTGCCGCACAACCCCGATGCCTGGCTGCTGACGGTCGCCCGCCGGCGGCAGACCGACGCGCTGCGCCGCCGCACCACGCGGCAGGCCGGCGAGGAGCATCTGAAAATGATCGCCGACGAAATCGAAGCCGCCGCCGAGGCGCCCGAGGACATCCCCGACCGGCGCCTGGCGCTGATGTTCGCCTGCGCCCACCCGGCGATCGAGCGCGGCATGCGCGCCCCGCTGATCCTCCAGACCATTCTCGGGCTCACCGCCATCGATATCGCCGCGGCCTTCCTGATCCCGCCGGCCACCATGGGCCAGCGCCTGGTGCGCGCCAAAGCCCGCATCAGGGATGCCGGCATCCCGTTCGGCATCCCCGACAAGGAGTTGCTGCCCGAACGGCTCGATGCGGTGCTCGAAGCCATCTACGCCGCCTATACCAAGGGCTGGGCCGAGATCGGCGATGCCGCCTCGATTGCACTCGCCGAGGAGGCCATCTGGCTCGGCCGGCTCGTCGTTGGCCTCTTGCCCGACGAGCCCGAGGCCAAGGGCATGCTGGCGCTGATGCTCTATACCGAGGCGCGCCGCGCCGCCCGCCGCTCGGCCGACGGGGCGTATGTGCCGCTCGAACAGCAGGACACAAGCCTCTGGGACGACTCGCAGATCGGCCTTGCCGAGGCGCTGCTGAAGGCGGCCAACGCCGCGGGCCCCTCGGGCCGTTACCAGATCGAAGCGGCGATCCAGTCCGCTCACGTCGCCCGCCGCACGCTCGGCGCCAATACGTGGCCGGCGATTCTCGCGCTCTACGATCACCTCCTGGCGCTCATCGCCTCCCCGGTGGTGGCGCTCAACCGCGCCATGGCACTGGCCGAGCTCGAAGGGCCGGACGCCGCGCTCGCCGCCTTGGCGCCGCTCAGCGCCGACAAGCGCATGGCCGACTATCAGCCCTACTGGGCAGCGCGCGGCCACCTGATGGCGCGGGCGGGCTTGAAGGGCGAGGCGCACGAAGCCCTCACCCTTGCCAGCGGCCTCGCCACCGACGAGGCGGTACGGCACTATCTGCGCGGCCAGATCGCAGCACTGGCGGACGGGTGA
PROTEIN sequence
Length: 416
MVRGESNEAARAAERVARESYGRLVAFLAARTRDVAGAEDALAEAFAAALHTWPTEGVPHNPDAWLLTVARRRQTDALRRRTTRQAGEEHLKMIADEIEAAAEAPEDIPDRRLALMFACAHPAIERGMRAPLILQTILGLTAIDIAAAFLIPPATMGQRLVRAKARIRDAGIPFGIPDKELLPERLDAVLEAIYAAYTKGWAEIGDAASIALAEEAIWLGRLVVGLLPDEPEAKGMLALMLYTEARRAARRSADGAYVPLEQQDTSLWDDSQIGLAEALLKAANAAGPSGRYQIEAAIQSAHVARRTLGANTWPAILALYDHLLALIASPVVALNRAMALAELEGPDAALAALAPLSADKRMADYQPYWAARGHLMARAGLKGEAHEALTLASGLATDEAVRHYLRGQIAALADG*