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SCNpilot_cont_500_bf_scaffold_37604_2

Organism: SCNPILOT_CONT_300_BF_Rhizobiales_66_14

partial RP 27 / 55 BSCG 28 / 51 MC: 3 ASCG 10 / 38
Location: 288..1643

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor RpoD n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RGS2_PELHB similarity UNIREF
DB: UNIREF100
  • Identity: 69.8
  • Coverage: 461.0
  • Bit_score: 584
  • Evalue 1.20e-163
RNA polymerase sigma factor RpoD {ECO:0000256|HAMAP-Rule:MF_00963}; Sigma-70 {ECO:0000256|HAMAP-Rule:MF_00963}; TaxID=1228055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. DDB001.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 82.6
  • Coverage: 455.0
  • Bit_score: 706
  • Evalue 2.30e-200
RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor similarity KEGG
DB: KEGG
  • Identity: 69.8
  • Coverage: 461.0
  • Bit_score: 584
  • Evalue 3.80e-164

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Taxonomy

Devosia sp. DDB001 → Devosia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1356
ATGGCCACCAAGGCAGCGACCCAGACAAAGACCAAAGACGCAGAAAAGCCGGAAGTTGCCGGCGTAGCCGGTGCAGCAGGCGGCGAGCCGCCTGATAGCCCGCTGCTCGACCTATCCGATGCCGCCGTAAAGAAGCTGATCAAGACCGCCAAGAAGCGCGGTTACGTCACCTATGAAGAGCTGAATGCCGTTCTGCCGTCGGAGGAGGTCAACTCCGAGCAGATCGAGGACATCATGGCGATGTTCTCCGACATGGGCATCAACGTCGTCGACGAGGACGAGGTCGAAGAGGCTGAGCCCGATACCCCGGAAGAGGAATCGACCGAGCTCGCCGAACGGACCGGCACCGCCGTCGCCTCGAAATCCAACACCCGCGAAGGCAGCGACCGTACCGATGATCCGGTGCGCATGTATCTGCGCGAGATGGGGTCGGTCGAACTGCTCAGCCGCGAGGGCGAAATCGCCATCGCCAAGCGCATCGAGGCCGGCCGCGAGACGATGATCGAGGGCCTGTGCGAGAGCCCGCTGACCTTCCAGGCCATCATCATCTGGCGCGACCAGCTGGCCAATGCCGAAATTCTGCTGCGCGACATCATCGACCTCGAGGCCACCTATGCCGGTCCCGACGCCAAGCAGGCGGCCCCGGTGATGCCGTCCGAGATCGAGCGCCCCGCCGCGGTCAAGGAAGAGGCCAAGCCCGCCAAGGCGAAGCCGGCGCCGCGCTCGGGCGACGACGAGGACGATTATGTTCCCGACGAGCCGCAGGCGCCGCAGGATCCGGTCGAGGAAGAAGACGACGATTTCGAGAACTCGCTGTCGCTTTCGGCGATGGAAGCCGAGCTGAAGCCGCAGGTGGTCGAGACCTTCGATCGCATCGCCGAAGCCTATGGCAAGATGCGCAAGATGCAGGATCGGCATGCCGAGGACCGCATGGCGGGCAATGCTCCGGCCACCGCCGCCGATCTCAAGAAGCTCGAAGGCCTGCGCTCCGAAGTGATCACCGACGTCAAGTCGCTGTCGCTGAACCAGAGCCGTATCGAGAGCCTGGTCGAGCAGCTCTACGACATCAACAAGCGCCTGGTGCGGCTCGAGGGGCGCCTGCTGCGCCTTGCCGAGAGCTATGGCGTCAAGCGCGAGAACTTCCTCGAGGCCTATTACGGCAGCGAGCTCGAGCAGAACTGGATCGAGAGCGTCGCGACGCTGTCGGCCAAGGGCTGGGCCGAATTCGCCAAGCGCGAGGCGGACACCGCCAACGAACTGCGCGGCGACATCCAGACGCTGGCGACCGAAACCGGCCTCGATATCGCCGAGTACCGCCGGATCGTCCACAAGGTGCAGAAGGGCGAGCGCGAAGCG
PROTEIN sequence
Length: 452
MATKAATQTKTKDAEKPEVAGVAGAAGGEPPDSPLLDLSDAAVKKLIKTAKKRGYVTYEELNAVLPSEEVNSEQIEDIMAMFSDMGINVVDEDEVEEAEPDTPEEESTELAERTGTAVASKSNTREGSDRTDDPVRMYLREMGSVELLSREGEIAIAKRIEAGRETMIEGLCESPLTFQAIIIWRDQLANAEILLRDIIDLEATYAGPDAKQAAPVMPSEIERPAAVKEEAKPAKAKPAPRSGDDEDDYVPDEPQAPQDPVEEEDDDFENSLSLSAMEAELKPQVVETFDRIAEAYGKMRKMQDRHAEDRMAGNAPATAADLKKLEGLRSEVITDVKSLSLNQSRIESLVEQLYDINKRLVRLEGRLLRLAESYGVKRENFLEAYYGSELEQNWIESVATLSAKGWAEFAKREADTANELRGDIQTLATETGLDIAEYRRIVHKVQKGEREA