ggKbase home page

SCNpilot_cont_500_bf_scaffold_39231_2

Organism: SCNPILOT_CONT_300_BF_Rhizobiales_66_14

partial RP 27 / 55 BSCG 28 / 51 MC: 3 ASCG 10 / 38
Location: 781..1587

Top 3 Functional Annotations

Value Algorithm Source
Ribonuclease E {ECO:0000256|HAMAP-Rule:MF_00970}; Short=RNase E {ECO:0000256|HAMAP-Rule:MF_00970};; EC=3.1.26.12 {ECO:0000256|HAMAP-Rule:MF_00970};; TaxID=361041 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia soli.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 84.0
  • Coverage: 269.0
  • Bit_score: 447
  • Evalue 1.10e-122
cytoplasmic axial filament protein CafA and ribonuclease G; K08300 ribonuclease E [EC:3.1.26.12] similarity KEGG
DB: KEGG
  • Identity: 75.8
  • Coverage: 269.0
  • Bit_score: 389
  • Evalue 6.30e-106
Ribonuclease E n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RAL2_PELHB similarity UNIREF
DB: UNIREF100
  • Identity: 75.8
  • Coverage: 269.0
  • Bit_score: 389
  • Evalue 2.00e-105

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Devosia soli → Devosia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 807
ATGGCTACAAAGCGCATGCTGGTGGATGCCATCCACCCGGAAGAAACACGGATCGTCGTCACTAACGGGAACCGGCTCGAAGAGTTCGATTTCGAATCCGCCCAGCGGCGGCAGCTCAGGGGTAATATCTACCTCGCCAAGGTGACGCGCGTGGAGCCCTCGCTCCAGGCGGCTTTCATCGAGTATGGCGGCAATCGCCACGGCTTCCTCGCTTTCTCGGAAATCCACCCCGACTACTACCAGATCCCCATCGCCGACCGCGAAGCGCTGCTGCGCGACGAGGCGCATGATGACGACGAGCACGATCACGAGCACGCCGCGGCCCAGGCGGCCGCGCCGGCCGAAGTGTCGTCGGAGCATGAAGAGGCCGAGGGCGACGAAGAGCACAGCCATATCGAGCAGGCGCCGACCAGCAACGAGCCGGTCGAGAGCGTCGGCGGTTCGGATGCGCTGGAGGACGTGCAGGAACGCCGCCGTCCGTCGCAGCGCCGGCACCAGTACAAGATTCAGGAAGTGATCAAGCGCCGGCAGGTGATGCTGGTGCAGGTGGTCAAGGAAGAGCGCGGCAACAAGGGCGCGGCTCTCACCGCCTACCTGTCGCTCGCCGGCCGCTACTCGGTGCTGATGCCCAATACCGCCCGTGGCGGCGGCATCTCGCGCAAGATCACCAACGCCGCAGACCGTAAGCGTCTCAAGGACATCGTCGGGGATCTTGAAGTGCCGCAGGGCCAGGGGATCATCCTCAGGACCGCCGGCGCCAGCCGCACCAAGGCCGAGGTCAAGCGCGACTTCGAGTACCTGCAGCGG
PROTEIN sequence
Length: 269
MATKRMLVDAIHPEETRIVVTNGNRLEEFDFESAQRRQLRGNIYLAKVTRVEPSLQAAFIEYGGNRHGFLAFSEIHPDYYQIPIADREALLRDEAHDDDEHDHEHAAAQAAAPAEVSSEHEEAEGDEEHSHIEQAPTSNEPVESVGGSDALEDVQERRRPSQRRHQYKIQEVIKRRQVMLVQVVKEERGNKGAALTAYLSLAGRYSVLMPNTARGGGISRKITNAADRKRLKDIVGDLEVPQGQGIILRTAGASRTKAEVKRDFEYLQR