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SCNpilot_cont_500_bf_scaffold_57526_1

Organism: SCNPILOT_CONT_300_BF_Rhizobiales_66_14

partial RP 27 / 55 BSCG 28 / 51 MC: 3 ASCG 10 / 38
Location: 3..1163

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Short=RNAP subunit beta {ECO:0000256|HAMAP-Rule:MF_01321};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01321};; RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Transcriptase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; TaxID=1228055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. DDB001.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 96.6
  • Coverage: 387.0
  • Bit_score: 736
  • Evalue 2.30e-209
DNA-directed RNA polymerase subunit beta; K03043 DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] similarity KEGG
DB: KEGG
  • Identity: 92.8
  • Coverage: 387.0
  • Bit_score: 711
  • Evalue 1.80e-202
DNA-directed RNA polymerase subunit beta n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RC44_PELHB similarity UNIREF
DB: UNIREF100
  • Identity: 92.8
  • Coverage: 387.0
  • Bit_score: 711
  • Evalue 5.60e-202

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Taxonomy

Devosia sp. DDB001 → Devosia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1161
ATCGACGACATCGACAACCTCGGCAACCGCCGGGTGCGTTCGGTCGGCGAACTGATGGAGAACCACTACCGGCTCGGTCTGCTCCGTATGGAGCGGGCGATCAAGGAGCGCATGTCGTCGGTCGAGATCGACACCGTCATGCCGCAGGACCTGATCAACGCCAAGCCGGCGGCTGCCGCGGTGCGCGAGTTCTTCGGCTCGTCGCAGCTCAGCCAGTTCATGGATCAGACCAACCCGCTTTCCGAGATCACGCACAAGCGTCGTCTCTCGGCGCTTGGGCCTGGTGGTCTGACCCGTGAGCGTGCCGGCTTCGAAGTCCGTGACGTGCACCCGACCCACTATGGCCGCATCTGCCCGATCGAGACGCCGGAAGGCCCGAACATCGGTCTTATCAACAGCTTGGCGACGTTTGCTCGCGTGAACAAGTATGGCTTCATCGAGACGCCGTACCGCAAGATCGTCAACGGCAAGGTCACCGACGACGTGGTCTATCTGTCGGCGATGGAGGAGGCCAAGCACTACGTCGCGCAGGCCAATGCCGAGCTGACCGACAAGCGTGAATTCGCCAACGACCTGATCGTGGCGCGCCACGCCGGTGACAACGGCCTGACGCCGAAAGAGACCATCGACCTGATGGACGTGTCGCCCAAGCAGATCGTTTCGGTGGCGGCCGCGCTCATCCCGTTCCTCGAGAACGACGACGCCAACCGCGCCCTGATGGGCTCGAACATGCAGCGTCAGGCTGTGCCGCTGCTGCGTGCCGAGGCTCCGTTCGTGGGCACTGGCATGGAGTCGGTCGTCGCCCGTGACTCGGGCGCCGCGATCGTCGCCAAGCGCAAGGGCATCGTCGACCAGGTGGATGCGACCCGTATCGTTATCCGCGCCACCGAAGAGACCGACGCGTCGAAGTCCGGCGTGGACATCTACAACCTGATGAAGTTCCAGCGTTCGAACCAGTCGACCTGCATCAACCAGCGCCCGCTGGTGGTGGTAGGCGACCACGTCGAAGCCGGCGACATCGTTGCGGATGGTCCCTCGACCGAACTGGGCGATCTGGCTCTCGGCCGCAACGTGCTCGTCGCGTTCATGCCGTGGAACGGCTACAACTTCGAAGACTCGATCCTGCTCAGCGAGAAGATCGCCATGCAGGACGTGTTCACC
PROTEIN sequence
Length: 387
IDDIDNLGNRRVRSVGELMENHYRLGLLRMERAIKERMSSVEIDTVMPQDLINAKPAAAAVREFFGSSQLSQFMDQTNPLSEITHKRRLSALGPGGLTRERAGFEVRDVHPTHYGRICPIETPEGPNIGLINSLATFARVNKYGFIETPYRKIVNGKVTDDVVYLSAMEEAKHYVAQANAELTDKREFANDLIVARHAGDNGLTPKETIDLMDVSPKQIVSVAAALIPFLENDDANRALMGSNMQRQAVPLLRAEAPFVGTGMESVVARDSGAAIVAKRKGIVDQVDATRIVIRATEETDASKSGVDIYNLMKFQRSNQSTCINQRPLVVVGDHVEAGDIVADGPSTELGDLALGRNVLVAFMPWNGYNFEDSILLSEKIAMQDVFT