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SCNpilot_cont_500_bf_scaffold_20151_2

Organism: SCNPILOT_EXPT_750_P_Devosia_62_26

partial RP 29 / 55 MC: 1 BSCG 32 / 51 MC: 2 ASCG 9 / 38
Location: comp(677..1183)

Top 3 Functional Annotations

Value Algorithm Source
ECF subfamily RNA polymerase sigma-24 factor n=1 Tax=Nitratireductor pacificus pht-3B RepID=K2M7E6_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 65.1
  • Coverage: 169.0
  • Bit_score: 205
  • Evalue 3.40e-50
RNA polymerase sigma factor {ECO:0000313|EMBL:KKB08261.1}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinhatensis.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 81.0
  • Coverage: 168.0
  • Bit_score: 276
  • Evalue 2.20e-71
prtI; ECF family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily similarity KEGG
DB: KEGG
  • Identity: 58.0
  • Coverage: 169.0
  • Bit_score: 191
  • Evalue 2.70e-46

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Taxonomy

Devosia chinhatensis → Devosia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 507
GTGGTCGATTTTCTCGATGAGCTCGAAGCCAATGTACCGGCCCTGCGCCGGTATGCGCGGGCGCTCACCCGCGATATCGATCGCGCCGACGACCTGGTGCAGGATTGCCTGGAGCGCGCCATCGGCCGTCGTGGGCTGTTCCAGCCACGTGGGCCGCTGCGCCCCTGGCTCTTCACCATTCTCACCAATTTGCATCGCAACAGCCGGCGCGAGGCGCGACGGCATGGCACCGTGCTCGATCTCGATGCGGTGGCTGAACCGGCAATCCCGGCCCCGCAGCCCGGTCATATGGCGCTGGCGGAGCTGGCGCGCGCCATCGACACCCTGCCACTCGATCAAAAGGAAGCCTTGCTGCTCGTGACTCTCGAAGGCCTTGCCTATGCCGAAGCCGCCGCCATTCTGGGCATCCCCACGGGCACGCTGATGAGCCGGTTGGGCCGTGCCCGTGCCAGCCTCAGGACCATGACCGGCACGCCGGCCGAGCCGCATTTGAGGACGGTCAAATGA
PROTEIN sequence
Length: 169
VVDFLDELEANVPALRRYARALTRDIDRADDLVQDCLERAIGRRGLFQPRGPLRPWLFTILTNLHRNSRREARRHGTVLDLDAVAEPAIPAPQPGHMALAELARAIDTLPLDQKEALLLVTLEGLAYAEAAAILGIPTGTLMSRLGRARASLRTMTGTPAEPHLRTVK*