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SCNpilot_cont_500_bf_scaffold_17195_2

Organism: SCNPILOT_EXPT_750_P_Devosia_62_26

partial RP 29 / 55 MC: 1 BSCG 32 / 51 MC: 2 ASCG 9 / 38
Location: comp(725..2014)

Top 3 Functional Annotations

Value Algorithm Source
tRNA-specific 2-thiouridylase MnmA {ECO:0000256|HAMAP-Rule:MF_00144}; EC=2.8.1.- {ECO:0000256|HAMAP-Rule:MF_00144};; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinhatensis.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 92.1
  • Coverage: 353.0
  • Bit_score: 664
  • Evalue 9.40e-188
tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase; K00566 tRNA-specific 2-thiouridylase [EC:2.8.1.-] similarity KEGG
DB: KEGG
  • Identity: 70.1
  • Coverage: 354.0
  • Bit_score: 517
  • Evalue 5.50e-144
tRNA-specific 2-thiouridylase MnmA n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R926_PELHB similarity UNIREF
DB: UNIREF100
  • Identity: 70.1
  • Coverage: 354.0
  • Bit_score: 517
  • Evalue 1.70e-143

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Taxonomy

Devosia chinhatensis → Devosia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1290
ATGCAATTGCCTTGCCAGTCGGTGTTTTGCAGGGAAAATCAACGAAAACAATATGTTAGATGGAGCCTGAATAGCAGCGACGCTTGGGCCTCTAGGTTGGAAAGGCCCATAGACCGGCAAAAGCTGCCGGGCGTGAATGGACAGAGGGCGCCGTCCGGCGTAAAAGGCCGCCCACAGTTTCCGCTGGCCCTTGAACCCAACCGGAACGAAGGAAAGATGCTGAACTCGCTTGATATTGCCAAGCGCCCGGAGGACACGCGCGTCGTCGTCGCCATGTCCGGAGGCGTGGATTCGTCGGTTGTTGCCGGTTTGCTGGCTCGAGAGGGCTATGACGTCGTCGGCGTGACGCTACAGCTTTACGATCATGGCGAAGCCATTCACCGCAAGGGCGCATGCTGCGCCGGGCAAGATATCCATGACGCCCGCCGCGTGGCCGCCAAGCTGGGGATTCCCCATTACGTGCTCGACTATGAAGAGCGCTTCAAAAACGCCGTCATCGAGCCCTTCGCCAATGCCTATCAGCAGGGTGAAACACCGGTGCCCTGCATTGCCTGCAACCAGTCGGTCAAGTTTGTCGATCTGATGCAGGTGGCGCAGGATCTGGGGGCCGACGTGTTGGCTACCGGCCATTATGTGCAGACCCGGCTCGGCGAGGACGGACGACGCCACCTCTTCCGGCCCGTCGACAGCGATCGCGACCAGTCCTATTTCCTCTTTGCCACAACCCAGGCGCAGCTGGATTTCCTGCGCTTTCCTTTGGGTGGCATGAGCAAGGCGGCGGTGCGTGAATTGGCGCGGGAATTCGGGCTCGAGATTGCCGAAAAGCATGATAGCCAGGACATCTGCTTCGTGCCGCAGGGCAAATATGCCGATATCATCGCCAAGATACATCCAGAAGCCATGGCCAAGGGCGATATCGTGCATCTGGATGGGCGCGTCCTCGGCGAGCACAATGGCATCGTCAATTACACTATCGGCCAGCGCAAGGGGCTCGGCGTTGCCGCCGGAGAGCCGCTTTACGTGGTCAAGCTCGACCATCGCAGCGGCCGCGTCATCGTCGGCCCGCGCGAGGCGCTGAAGACCCATACGGTGCGGTTGCGCGATGTAAACTGGCTGGGCGGTCTGCCGCTGGCGGAAGCCAGCGCCGGCAATGGCGCGCCGGTCGAGGTCAAGGTGCGCTCGACGCGCGGCCCGCAGCCAGCGGTGATCCAGATGCGCGACGGCGCGGTTTATGTCACTCTGGTCTCAGGGGAATACGGCATTTCGCCGGGCCAGGCCTGGGCGGTCTAG
PROTEIN sequence
Length: 430
MQLPCQSVFCRENQRKQYVRWSLNSSDAWASRLERPIDRQKLPGVNGQRAPSGVKGRPQFPLALEPNRNEGKMLNSLDIAKRPEDTRVVVAMSGGVDSSVVAGLLAREGYDVVGVTLQLYDHGEAIHRKGACCAGQDIHDARRVAAKLGIPHYVLDYEERFKNAVIEPFANAYQQGETPVPCIACNQSVKFVDLMQVAQDLGADVLATGHYVQTRLGEDGRRHLFRPVDSDRDQSYFLFATTQAQLDFLRFPLGGMSKAAVRELAREFGLEIAEKHDSQDICFVPQGKYADIIAKIHPEAMAKGDIVHLDGRVLGEHNGIVNYTIGQRKGLGVAAGEPLYVVKLDHRSGRVIVGPREALKTHTVRLRDVNWLGGLPLAEASAGNGAPVEVKVRSTRGPQPAVIQMRDGAVYVTLVSGEYGISPGQAWAV*