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SCNpilot_cont_500_bf_scaffold_21543_4

Organism: SCNPILOT_EXPT_750_P_Devosia_62_26

partial RP 29 / 55 MC: 1 BSCG 32 / 51 MC: 2 ASCG 9 / 38
Location: 1457..2536

Top 3 Functional Annotations

Value Algorithm Source
Transcription-repair-coupling factor {ECO:0000256|HAMAP-Rule:MF_00969}; Short=TRCF {ECO:0000256|HAMAP-Rule:MF_00969};; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_00969};; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 85.8
  • Coverage: 359.0
  • Bit_score: 638
  • Evalue 7.90e-180
transcription-repair coupling factor; K03723 transcription-repair coupling factor (superfamily II helicase) [EC:3.6.4.-] similarity KEGG
DB: KEGG
  • Identity: 68.3
  • Coverage: 347.0
  • Bit_score: 482
  • Evalue 9.50e-134
Transcription-repair-coupling factor n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R912_PELHB similarity UNIREF
DB: UNIREF100
  • Identity: 68.3
  • Coverage: 347.0
  • Bit_score: 482
  • Evalue 3.00e-133

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Taxonomy

Devosia riboflavina → Devosia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1080
ATGGTTCCGCCCGTCCGCACATTGTCCAATGTGCCGGACGGAATGCAGCCCCTGGTGCTGTCACGGCTGGTAGAGCAGCGGCTGAAGGCCGCGCCGGAAGATGCCGCGGCATTGGTTTTCGTGGCGCGCGACGGCCGGCGCATGCAGCGCATGGCCGAGGTGCTTGGCGCCATGCTGCCCGGCCACACCATCCTGACGCTGCCGGCCTGGGACTGTCTGCCCTATGACCGGGTCTCGCCGAACAACGTGACCATTGCCGCGCGCATGAATGCGCTGGCTGCGCTTGCCGGCGCTACCAAGGGCGCGATTGTACTGACTGCGGTCAATGCGCTGATCCAGAAGTTACCGCCGCGCGACATGGTGGAAACCATGTCGTTTTCTGCGGCTGTTGGGCGGGTCGTGGACAGCGACAAGCTCGTGGCCTGGGCTGCGAATAATGGGTATCTGCGGGTGCCCACTGTTCGCGAGAGCGGGGAATTCGCGGTGCGTGGCGGGTTGGTGGACCTGTTCCCGGCCAGCTTCGATTCGCCTTTGAGGTTCGACTTCTTTGGCAGTCAGCTGGAATCCATTCGCACATTCGATCCGGACAGTCAGCGCACCACGGGCACACTGAAACGCGTTGATCTGACCCCGATGAGCGAGGTGATGCTCAACGAGGAAACGATCAGGCGCTTCCGCCAGAACTACACGGCAGCCTTTGGCGGCAACACCGTCGATGACACGCTTTACGCCTCTGTCAGCGGTGGCGCCCGCTATTCCGGCACCGAGCACTGGCTGCCCTTCTTCTACGACCATCTGGATCGGCTGTCGGATTATGTTGGCGACGCGCCATTCGTGTTCGACGATCAGGCGGCAGAGGCCTATGCCGAACGCGTCGAGCAAATCCGTGACTACTATCAGGCGCGTGAGGCAGCACGCCTCGCGCCGCCTGTCGCGGGCAGTGGCGCTCCTTACAAGCCGATCAAGCCCGATCTGCTTTACGACCTGGAGCAACATCCCTATGCGCTGGCCGGTGCCAGCGTCGTCCAGCTCTCGCCGTTCCTTTCGCCACAGGCCGGCAAAGCAGATGACGTTGGCGGG
PROTEIN sequence
Length: 360
MVPPVRTLSNVPDGMQPLVLSRLVEQRLKAAPEDAAALVFVARDGRRMQRMAEVLGAMLPGHTILTLPAWDCLPYDRVSPNNVTIAARMNALAALAGATKGAIVLTAVNALIQKLPPRDMVETMSFSAAVGRVVDSDKLVAWAANNGYLRVPTVRESGEFAVRGGLVDLFPASFDSPLRFDFFGSQLESIRTFDPDSQRTTGTLKRVDLTPMSEVMLNEETIRRFRQNYTAAFGGNTVDDTLYASVSGGARYSGTEHWLPFFYDHLDRLSDYVGDAPFVFDDQAAEAYAERVEQIRDYYQAREAARLAPPVAGSGAPYKPIKPDLLYDLEQHPYALAGASVVQLSPFLSPQAGKADDVGG