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SCNpilot_cont_500_bf_scaffold_41264_1

Organism: SCNPILOT_EXPT_750_P_Devosia_62_26

partial RP 29 / 55 MC: 1 BSCG 32 / 51 MC: 2 ASCG 9 / 38
Location: comp(1..1155)

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Short=RNAP subunit beta {ECO:0000256|HAMAP-Rule:MF_01321};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01321};; RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Transcriptase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinhatensis.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 95.3
  • Coverage: 385.0
  • Bit_score: 745
  • Evalue 3.80e-212
DNA-directed RNA polymerase subunit beta; K03043 DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] similarity KEGG
DB: KEGG
  • Identity: 86.5
  • Coverage: 385.0
  • Bit_score: 680
  • Evalue 2.60e-193
DNA-directed RNA polymerase subunit beta n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RC44_PELHB similarity UNIREF
DB: UNIREF100
  • Identity: 86.5
  • Coverage: 385.0
  • Bit_score: 680
  • Evalue 8.10e-193

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Taxonomy

Devosia chinhatensis → Devosia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1155
ATGGCTACCACGTTCAACGGCCGACGCAAGGTTCGCAAGTCCTTCGGGTCCATCCGCGAAGTCACGGACATGCCCAACCTGATCGAAGTCCAAAAGGCTTCCTATGATCAGTTTCTGATGGTCAACGAGCCCAAGGGCGGTCGTTCCGATGAGGGACTGCAGTCCGTGTTCCGCTCGGTGTTCCCCATCACCGACTTCTCGAACACTGCCAGCCTCGAATTCGTGCGTTACGAATTCGAACAGCCTAAATATGACATCGAAGAGTGCCGTGCGCGCGACATCACGTTTGCTGCCCCGCTCAAGGTGACGCTGCGGCTGATCGTGTTCGAAGTGGACGAGGAAACCGGCGCCCGTTCGGTCAAGGACATCAAGGAGCAGGACGTCTATATGGGCGACATGCCCTTCATGACGTCGAATGGCACCTTCATCGTCAACGGCACCGAGCGCGTCATCGTTTCGCAGATGCACCGTTCGCCTGGCGTGTTCTTTGACCACGACAAGGGCAAGACCCATTCCTCGGGCAAGCTGCTGTTCGCTGGCCGCATCATTCCCTATCGCGGTTCCTGGCTCGATATCGAATTCGACGCCAAGGACATCGTCTATGCGCGTATCGACCGTCGCCGCAAGATTCCGGTCACCTCGCTGCTCAAGGCGCTTGGCATGGACGCCGAGGAAATCCTCGCGACCTATTACAACACCCTGCAGTACGAAAAGACCGAGAAGGGCTGGCGCGTTCCCTACGACGCCGAGAAGTGGAAGGGCGCTAAGCCGACCCACGACCTGATCGACGCCACCACTGGCGACGTTGTGCATGAGGGTGGCAAGAAGCTCTCCGCTCGCCAGGCCAAGAAGCTGGCCGAGAACGGCCTGACCCACCTCTTGGCCGTCGATGCCGACCTCTTCGGCATGTATCTGGCCGAAGACCTGGTCAACCTCAAGACCGGTGAGATCTACGCCGAAGCCGGCGACGAGATCGACGAGAAGCTGCTTACCAAGCTGGTCGATATGGGCTTTGACGAGCTGCCGCTGCTCGACATCGACCACATCACCATTGGCGCCTATATCCGCAACACGCTGGCCGTGGACAAGAATGAGAGCCGCGAAGACGCTCTGTTCGACATCTACCGCGTCATGCGTCCGGGTGAGCCGCCGACC
PROTEIN sequence
Length: 385
MATTFNGRRKVRKSFGSIREVTDMPNLIEVQKASYDQFLMVNEPKGGRSDEGLQSVFRSVFPITDFSNTASLEFVRYEFEQPKYDIEECRARDITFAAPLKVTLRLIVFEVDEETGARSVKDIKEQDVYMGDMPFMTSNGTFIVNGTERVIVSQMHRSPGVFFDHDKGKTHSSGKLLFAGRIIPYRGSWLDIEFDAKDIVYARIDRRRKIPVTSLLKALGMDAEEILATYYNTLQYEKTEKGWRVPYDAEKWKGAKPTHDLIDATTGDVVHEGGKKLSARQAKKLAENGLTHLLAVDADLFGMYLAEDLVNLKTGEIYAEAGDEIDEKLLTKLVDMGFDELPLLDIDHITIGAYIRNTLAVDKNESREDALFDIYRVMRPGEPPT