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SCNpilot_cont_500_bf_scaffold_17716_4

Organism: SCNPILOT_EXPT_750_BF_Myxococcales_68_20

partial RP 28 / 55 MC: 2 BSCG 23 / 51 MC: 3 ASCG 5 / 38
Location: 3473..3880

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein; K14441 ribosomal protein S12 methylthiotransferase [EC:2.-.-.-] similarity KEGG
DB: KEGG
  • Identity: 69.1
  • Coverage: 136.0
  • Bit_score: 186
  • Evalue 4.10e-45
Ribosomal protein S12 methylthiotransferase RimO {ECO:0000255|HAMAP-Rule:MF_01865}; Short=S12 MTTase {ECO:0000255|HAMAP-Rule:MF_01865};; Short=S12 methylthiotransferase {ECO:0000255|HAMAP-Rule:MF_01865};; EC=2.8.4.4 {ECO:0000255|HAMAP-Rule:MF_01865};; Ribosomal protein S12 (aspartate-C(3))-methylthiotransferase {ECO:0000255|HAMAP-Rule:MF_01865}; Ribosome maturation factor RimO {ECO:0000255|HAMAP-Rule:MF_01865}; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; similarity UNIPROT
DB: UniProtKB
  • Identity: 69.1
  • Coverage: 136.0
  • Bit_score: 186
  • Evalue 1.80e-44
Ribosomal protein S12 methylthiotransferase RimO n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=RIMO_SORC5 similarity UNIREF
DB: UNIREF100
  • Identity: 69.1
  • Coverage: 136.0
  • Bit_score: 186
  • Evalue 1.30e-44

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Taxonomy

Sorangium cellulosum → Sorangium → Myxococcales → Deltaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 408
GTGTCGAAGAAACGCATCCACTTCGTGAGCCTCGGCTGCCCCAAGAACCGAGTCGACACGGAGGTCATGGTCGGCGTCGCGCTCGGCGAAAAAGGCCGCGGCGGGTGGGAGCTCACCGACGAGGCGGACGAGGCCGAGGTCATCGTCGTCAACACGTGCGGCTTCATCGGCGAAGCGAAGAAGGAGTCGATCGACACCATCTTCGAAATGGCCGAGCTCAAGAAGGTCGGCGCGTGCAAGAAGCTCGTGGTCACGGGCTGCCTCTCCCAGCGCTACCCGCAAGAGCTCTCGACGCAGATGCCCGAGGTCGACCACTTCCTCGGGTCGAGCGACATGCTCGCGCTCGGCCGCATCCTCGCCGACAAGAAGAACACGACGCCGCGCATGCTCGTCGGCAACCCCGCCGAC
PROTEIN sequence
Length: 136
VSKKRIHFVSLGCPKNRVDTEVMVGVALGEKGRGGWELTDEADEAEVIVVNTCGFIGEAKKESIDTIFEMAELKKVGACKKLVVTGCLSQRYPQELSTQMPEVDHFLGSSDMLALGRILADKKNTTPRMLVGNPAD