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SCNpilot_cont_500_bf_scaffold_20737_3

Organism: SCNPILOT_EXPT_750_BF_Myxococcales_68_20

partial RP 28 / 55 MC: 2 BSCG 23 / 51 MC: 3 ASCG 5 / 38
Location: comp(970..2607)

Top 3 Functional Annotations

Value Algorithm Source
Lipid A ABC exporter, fused ATPase and inner membrane subunits MsbA n=1 Tax=Acidovorax sp. NO-1 RepID=H0C3L8_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 30.8
  • Coverage: 536.0
  • Bit_score: 170
  • Evalue 3.90e-39
ABC transporter {ECO:0000313|EMBL:KES05330.1}; TaxID=55952 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces toyocaensis.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 32.1
  • Coverage: 546.0
  • Bit_score: 170
  • Evalue 5.40e-39
ABC transporter similarity KEGG
DB: KEGG
  • Identity: 31.6
  • Coverage: 570.0
  • Bit_score: 165
  • Evalue 3.90e-38

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Taxonomy

Streptomyces toyocaensis → Streptomyces → Streptomycetales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1638
GTTGCACGCCTTCACCTGTCTGGGGCGCCGGACAAGGCGGTATTGGTGCTCGCCGTCGCCGGCGTGTTCGCGGCGATCGTCAAGTTGGTTGGCGGCGCGCTCTCGTCGTGGGCGGAGGCGCGCGTGGCGGGTGATGTCGCCGCGCGTGTTCGCCTCGCGGTGCTCGATTCCGTCCTTGCTCTCAACCGCTTGCATACTCCACGACACGTCGATCATGGATCGAGTGCCATCGGCGCGGTTGGCACGCATGCGGATCGGCTCGCCGCTCTGACGAGCCACGTCGCCGACGTCGAGCGGGGCGTGGCGCACGGCGTGCTTGCCGAGGTGCGCGCGGCGGTGCAGCTCATCCCTCTCGGGGCGCTCCTCGTCGTCCTCGCTCCGCGGCTGGCCGGCAGCGCGGTCGTCGCCCTCGGCGGATTCGGGGTGCTCGCGTTCGGGCTCCGCCGCGCGTTCAAGCGCGCGCATGCGCGAGCGACGGCCTCGTCGAGCGCGCTCGTCGAGGCGGCGGACGAGGCGGTCCGGCATGCGGAGCTCTGGGCGACGTATGGAGCGAAGCGGCGCATCCGCGCGCACGTCGCCAGCGTGGGCCGCGCGATCGCGCGCGAGGCCGCGCGGATCCGCGTCCGTGCGTCGCTCCTGTCGTCGACGAGCGAGGTCCTCGGCGCTACGGCGCTCGTGCTCGTCCTCCTGCTCGCGTCGCGCGGCGCGCTGGGCGTGGATCACGGCACGGTGGTGCCGTTCGCGATCGCGTTCTTCATGGCGTATCGGCCGCTGCGCGATCTCGTCGACGCGCGCCTCGCGCGAGCGCGGGGTGAGGAGGCGCTGCGTGCCGCGCTTGGTGAGACCGCGGAAGCGCCTCCGTCACGTGGGGCGACCCCGGCGGCGCCGACGGCCATGTCCTGGACGCTCGACGAGCTCGTCCTCTCCGGCGTGCGCACGCAGCACGGCGAGCACACGCCGCTCTCGATCACCGTGCCGCCCGGATCGATCGCGGCGGTCGTCGGGCCCACGGGGACGGGGAAGACGTCGTTGCTCCGCGTGCTGCTCGGGCTCGATCCCGTCCGCGAGGGCGAGATCCGCTACGGGGCGCTCGTCCTCGATGCGTCGTCGTCTCCTGTCGACAGGGCGTCGGCGGTGGAGGAGCGTGCTGGCGTCGGGCCGGGGGCGCGGCCCTTTGCGTGGGTGCCGCAAGATGCGCCGATCGTCGGCGACACGCTTGCGATCAACGTCGGGCTCGGCCGAGCGGACGACGACGCGGCGATCCCCGATCCGGCGCCGGTGTTGGCCCAGCTCGGGAACGAAGCGCTCGGCACGGCGCTCGGTGACGAGGTGCTCGGGACCGCGCGTCCGCTCTCCGGCGGAGAGCGCCAGTGGATCGCCGTCGCACGTGCGCTCGCGACGGGGCTGCCTGTCCTCTTGCTCGACGAGCCGACGAGCGCGCTCGACGGAGCGTCGCAGGCGCGCCTGCTCGAGGCGATCGCGCGGCTGCGCGGGGAGCGTACGGTGATCCTCGTGACGCACCGCCCGGAGCCGCTCGCGATCGCAGACGTGATCGTTCGGCTCGAGCCGCTCACCGACGGAGACGGACTGCCTGGATCTCCGAACCCAACGCATCGGCCGACAGACGTCCGGCGCTGA
PROTEIN sequence
Length: 546
VARLHLSGAPDKAVLVLAVAGVFAAIVKLVGGALSSWAEARVAGDVAARVRLAVLDSVLALNRLHTPRHVDHGSSAIGAVGTHADRLAALTSHVADVERGVAHGVLAEVRAAVQLIPLGALLVVLAPRLAGSAVVALGGFGVLAFGLRRAFKRAHARATASSSALVEAADEAVRHAELWATYGAKRRIRAHVASVGRAIAREAARIRVRASLLSSTSEVLGATALVLVLLLASRGALGVDHGTVVPFAIAFFMAYRPLRDLVDARLARARGEEALRAALGETAEAPPSRGATPAAPTAMSWTLDELVLSGVRTQHGEHTPLSITVPPGSIAAVVGPTGTGKTSLLRVLLGLDPVREGEIRYGALVLDASSSPVDRASAVEERAGVGPGARPFAWVPQDAPIVGDTLAINVGLGRADDDAAIPDPAPVLAQLGNEALGTALGDEVLGTARPLSGGERQWIAVARALATGLPVLLLDEPTSALDGASQARLLEAIARLRGERTVILVTHRPEPLAIADVIVRLEPLTDGDGLPGSPNPTHRPTDVRR*