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SCNpilot_cont_500_bf_scaffold_23822_3

Organism: SCNPILOT_EXPT_750_BF_Myxococcales_68_20

partial RP 28 / 55 MC: 2 BSCG 23 / 51 MC: 3 ASCG 5 / 38
Location: 2097..2348

Top 3 Functional Annotations

Value Algorithm Source
Shikimate dehydrogenase (NADP(+)) {ECO:0000256|HAMAP-Rule:MF_00222}; Short=SDH {ECO:0000256|HAMAP-Rule:MF_00222};; EC=1.1.1.25 {ECO:0000256|HAMAP-Rule:MF_00222};; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source="Chondromyces apiculatus DSM 436.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 56.5
  • Coverage: 85.0
  • Bit_score: 87
  • Evalue 7.10e-15
shikimate 5-dehydrogenase; K00014 shikimate dehydrogenase [EC:1.1.1.25] similarity KEGG
DB: KEGG
  • Identity: 48.2
  • Coverage: 85.0
  • Bit_score: 81
  • Evalue 2.00e-13
Shikimate dehydrogenase n=1 Tax=Roseiflexus sp. (strain RS-1) RepID=A5UTK3_ROSS1 similarity UNIREF
DB: UNIREF100
  • Identity: 45.2
  • Coverage: 84.0
  • Bit_score: 81
  • Evalue 6.20e-13

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Taxonomy

Chondromyces apiculatus → Chondromyces → Myxococcales → Deltaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 252
ATGCACGGTGCCGCGTTCCGTGCGCTCGGTCTCCCGCACACCTACGACAAGATCGAGACCAGCGCCGGCGAGCTCGGCGACCGCGTCGGTGCGCTTCGCGCCGGCGAGCTCGCGGGGCTGAACGTGACGGTCCCGCACAAGACGCGGGTGCTCGAGCTGGTCGATGCGGTCGATCCGAGCGCGGACGCGACCGGCGCCGCGAACACGCTGGTGCGCACCGCGGCCGGTTCGGTCCGCGCGTTCAACACCGAC
PROTEIN sequence
Length: 84
MHGAAFRALGLPHTYDKIETSAGELGDRVGALRAGELAGLNVTVPHKTRVLELVDAVDPSADATGAANTLVRTAAGSVRAFNTD