ggKbase home page

SCNpilot_cont_500_bf_scaffold_29280_1

Organism: SCNPILOT_EXPT_750_BF_Myxococcales_68_20

partial RP 28 / 55 MC: 2 BSCG 23 / 51 MC: 3 ASCG 5 / 38
Location: 128..430

Top 3 Functional Annotations

Value Algorithm Source
Helix-turn-helix domain protein n=1 Tax=Variovorax paradoxus (strain EPS) RepID=E6UXH5_VARPE similarity UNIREF
DB: UNIREF100
  • Identity: 63.2
  • Coverage: 68.0
  • Bit_score: 92
  • Evalue 3.20e-16
helix-turn-helix domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 63.2
  • Coverage: 68.0
  • Bit_score: 92
  • Evalue 1.00e-16
Variovorax paradoxus strain MEDvA23 contig_8, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ35884.1}; TaxID=34073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 63.2
  • Coverage: 68.0
  • Bit_score: 92
  • Evalue 2.70e-16

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Variovorax paradoxus → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 303
ATGACGGTGCAGAAGCTCGAGGCCGGCAGCATCGATCCACGGATGTCGACCATCGCCGTGCTCCTGCGCGTCCTCGGACTGGAGCTGATGCTCGTCCCCGCGGGACTGAAACCCGCCGTCGAAGACTTCCTCCAGTCGGGCGGTCGCATCGTGGCGCAGCCGGCCGGTGTCGGCGCCCCGGCGTCCATCGTCGAGGTCCTCTCCCGCATGCCGCACGCGAAGAAGACGAAGAGGAAGCAGAAGAAGAGCGCGACCGGAGAGCCGCTCACGCAGCAGGAACGGAGCAACCGGCGTAAGCAATGA
PROTEIN sequence
Length: 101
MTVQKLEAGSIDPRMSTIAVLLRVLGLELMLVPAGLKPAVEDFLQSGGRIVAQPAGVGAPASIVEVLSRMPHAKKTKRKQKKSATGEPLTQQERSNRRKQ*