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SCNpilot_cont_500_bf_scaffold_32967_1

Organism: SCNPILOT_EXPT_750_BF_Myxococcales_68_20

partial RP 28 / 55 MC: 2 BSCG 23 / 51 MC: 3 ASCG 5 / 38
Location: comp(3..854)

Top 3 Functional Annotations

Value Algorithm Source
Efflux transporter, RND family, MFP subunit n=1 Tax=Leptospira wolbachii serovar Codice str. CDC RepID=R9A4S8_9LEPT similarity UNIREF
DB: UNIREF100
  • Identity: 33.2
  • Coverage: 226.0
  • Bit_score: 131
  • Evalue 1.00e-27
Efflux transporter, RND family, MFP subunit {ECO:0000313|EMBL:EOQ97112.1}; TaxID=1218599 species="Bacteria; Spirochaetes; Leptospirales; Leptospiraceae; Leptospira.;" source="Leptospira wolbachii serovar Codice str. CDC.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 33.2
  • Coverage: 226.0
  • Bit_score: 131
  • Evalue 1.50e-27
RND family heavy metal efflux transporter MFP subunit similarity KEGG
DB: KEGG
  • Identity: 31.4
  • Coverage: 261.0
  • Bit_score: 128
  • Evalue 2.80e-27

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Taxonomy

Leptospira wolbachii → Leptospira → Spirochaetia → Spirochaetes → Bacteria

Sequences

DNA sequence
Length: 852
GTGACGAAACGCCCCTCGCCCACGCGCTGGATCGTCGGCGGGCTCGGTCTGACTCTCCTCATCGGCGCCGCCGCCGCCTACAAGACGAGGAGCGCCAAGCCGAGTCCCGGTGTGGAGGTGCACCGCGACGTCCCGCACCTCGAGGGAAACACGATCGTGTTCTCTCCAGCGTTTCGCGATCGTGCCGCGATCGCCTTCGCGAAGGCGGAGCGCGTTCCCTTCAAGCCGATGGTCCGTGTCGTCGGCACGGTGTCGTTCAACCCGAGCTACGTCGCGGCGATCGGGACGCGTCTCCGCGGCACCGTCCGGCGCACCTTCAAGTACGAAGGAGACCGGGTCGCGCCGAACGAGGCGCTCGCCGAGGTCGAGAGTGCCGAGCTCGGCGAGGCGCAGGCAACGATCGCGCAGGCCGAGGCGACGCAGAAGGCCGCCGAGATGCACGCTCGCCGGGAGCAGGAGCTCCTCGACAAGGGCCTCACGACCGCGCGCGAAGCCGAGGTGGCGAGCAGCGAGCTCGCGACCTCCCGAGCCAGCCTGTTGGCGGCACAGCAGCGCGTGAAGGCGTTCGGCGGCAACGGCGCCTTCGGTCTGTTCGTCCTCCGGACACCGATCGGCGGTCACATCGTGGAGCGCCACATCTCACCGGGGCAGTCCGTCGACAGCAATGTCGTCGGCTACAAGGTCGCCGACCTCGCTCACCTCTGGATCGAGCTCTCGGTGTTCGAGCGCGACGTCGGCTCCGTTCACGTGGGCGACGACGCCGACGTGACGCCTCTCGCGCAGCCGGACCAACAGATCGGCGGGCGCGTCGCACACGTGGGAGAGCTCATCGATCCGACGACCCGGAGCACG
PROTEIN sequence
Length: 284
VTKRPSPTRWIVGGLGLTLLIGAAAAYKTRSAKPSPGVEVHRDVPHLEGNTIVFSPAFRDRAAIAFAKAERVPFKPMVRVVGTVSFNPSYVAAIGTRLRGTVRRTFKYEGDRVAPNEALAEVESAELGEAQATIAQAEATQKAAEMHARREQELLDKGLTTAREAEVASSELATSRASLLAAQQRVKAFGGNGAFGLFVLRTPIGGHIVERHISPGQSVDSNVVGYKVADLAHLWIELSVFERDVGSVHVGDDADVTPLAQPDQQIGGRVAHVGELIDPTTRST