ggKbase home page

SCNpilot_cont_500_bf_scaffold_39892_1

Organism: SCNPILOT_EXPT_750_BF_Myxococcales_68_20

partial RP 28 / 55 MC: 2 BSCG 23 / 51 MC: 3 ASCG 5 / 38
Location: comp(2..778)

Top 3 Functional Annotations

Value Algorithm Source
transcriptional regulator n=1 Tax=Myxococcus xanthus RepID=UPI000378FC18 similarity UNIREF
DB: UNIREF100
  • Identity: 38.5
  • Coverage: 262.0
  • Bit_score: 151
  • Evalue 1.50e-33
DNA-binding regulatory protein; K03088 RNA polymerase sigma-70 factor, ECF subfamily similarity KEGG
DB: KEGG
  • Identity: 38.5
  • Coverage: 262.0
  • Bit_score: 151
  • Evalue 4.70e-34
Putative DNA-binding regulatory protein {ECO:0000313|EMBL:ABF91919.1}; TaxID=246197 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Myxococcus.;" source="Myxococcus xanthus (strain DK 1622).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 38.5
  • Coverage: 262.0
  • Bit_score: 151
  • Evalue 2.10e-33

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Myxococcus xanthus → Myxococcus → Myxococcales → Deltaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 777
ATGAACCTCGACGAATTCGTCTCGACAGCGAGAGCGGCCTGGCCGGCGTGGCCGGGCTCGGATCCCGAGGCGTTCGCTCGCTTCGTCGAGGAGCTGCACGCGAACGCAGAAGACAAGGCGCCGCTGGACTCGTTGCACGCCGCCGACCTTTGGCTGGCGTTCCACGCGGGCCGCGGGCTCGCCCCCGCCATCGCCGCGCTCGAGGCGAGCTGCTTCGCCGACCTGACTCACGTCCTCCGAGCACGTCGCGCGGAGCCGGCTCAGGCCGAAGAGGCCGTGCAGCGGCTCCGCCATCGACTCCTCGTCGCCGACCCCGGACAGCGCGCGCGCATCCTGACGTACGCCGGCCGGGGCGAGCTCCGTGCCTGGGTGCGCGTCGCAGCCGTGCGCGGATGGCTCAACATGAAGCGCGAGGCGCCGCTCGGCGGCAGCGGCCCGAGCGTCGAAGACGCCCTCGTCACCGAGGCGACGAGCGATCTCGAGCTCGAGCTGCTGAAGGGCAAGTACCGCGAGCTGTTCCGCCGCGTCTTCCTCGAGGCGGTCGACGCTCTCGCGCCGGGCACGCGCCTCCTCCTCAAGCTCCACTACCTCGATCGTCTCTCGATGGAGGAGGTCGGCAAGGTACTCGGCGTTCATCGGCTCACCGTCCTGAGGCGCCTCGAGCGCGCACGCCACGAGCTCTCCGAAGGAACGAAGGAGCGCCTCGAGCAGGAGCTGCGGCTCGCGCCTCCGGAGGTCGAGAGCCTGCTCCGGTTGATCCAGAGCCGGCTCGATGTG
PROTEIN sequence
Length: 259
MNLDEFVSTARAAWPAWPGSDPEAFARFVEELHANAEDKAPLDSLHAADLWLAFHAGRGLAPAIAALEASCFADLTHVLRARRAEPAQAEEAVQRLRHRLLVADPGQRARILTYAGRGELRAWVRVAAVRGWLNMKREAPLGGSGPSVEDALVTEATSDLELELLKGKYRELFRRVFLEAVDALAPGTRLLLKLHYLDRLSMEEVGKVLGVHRLTVLRRLERARHELSEGTKERLEQELRLAPPEVESLLRLIQSRLDV