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SCNpilot_cont_500_bf_scaffold_49683_2

Organism: SCNPILOT_EXPT_750_BF_Myxococcales_68_20

partial RP 28 / 55 MC: 2 BSCG 23 / 51 MC: 3 ASCG 5 / 38
Location: 93..1898

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9G9R6_SORC5 similarity UNIREF
DB: UNIREF100
  • Identity: 52.8
  • Coverage: 451.0
  • Bit_score: 414
  • Evalue 1.70e-112
  • rbh
RNA polymerase sigma factor rpoD; K03089 RNA polymerase sigma-32 factor similarity KEGG
DB: KEGG
  • Identity: 52.8
  • Coverage: 451.0
  • Bit_score: 414
  • Evalue 5.30e-113
  • rbh
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000715}; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum (strain So ce56) (Polyangium cellulosum (strain; So ce56)).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 52.8
  • Coverage: 451.0
  • Bit_score: 414
  • Evalue 2.40e-112

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Taxonomy

Sorangium cellulosum → Sorangium → Myxococcales → Deltaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1806
ATGACCCACCCGCTCTCCCCCCAGCTCTCGCCTTCGGCAACCCCCAGCGCCGACGCGGGGTCCGTCGCGCTGACTCGGAAGAGAAAGCGTGATAGACCGGCCGACGTGTCGCGTGAGCCGACTGTGAAGCGTCCCCAGCAGGGGAAGACCACCGCGCAGGGCAAGGCCCGCGGTGCCGGAAGGGGCAAGGGCTCCGAGTCGCCGAGCGATTCGGAGGAGACCAAGCCCAGGGAAGAGGACGACGAGGAGGCCACCGAGCGCGACTCCGAGCCCGCTGGGGTGGACGACGAGATCGCTGGGGCCGAGGCTGACGACGACACGGACGCGTTCGCCGAGCCGAGCGAGGACGAAGGCGAGCGCGAATCGGGCGCCCACTCCGGACCGCTGTCGAAACCGATGTCGAGCGGCTCGACGGAGCGGCTCGACCCGATGGCCGCTTACCTCCGCGAGGTCCAGCGTCATCCGCTGCTCACGCCGGAGCAGACGCACGAGCTGGCAGCGAAGTTCGTCCAGACGCAGGACCCCGCGATCGCGGCCCAGCTCGTCACGGCGAACCTGCGCCTCGTGGTCAAGATCGCCTACGAGTACCGTCGCGCCTACAAGAACATCATGGACCTCGTGCAGGAGGGCAACATCGGCCTCATGCAGGCGGTCAAGCGGTACGACCCGTACCGCGGCGTGAAGCTCTCGAGCTACGCGGCCTGGTGGATCCGCGCCTACATCCTGAGGTTCATCCTCAACAACTGGCGCCTCGTGAAGCTGGGGACGACCCAGGCGCAGCGAAAGCTGTTCTTCAACCTTCGGAAGAAGCGGGCCGAGCTCCAGGCGATGGGCGTCGATCCGACCAACGCCGAGATCGCCAAGCACCTCAACGTCCCCGAGAGCGACGTCGCCGAGATGGACGTGCGCCTCGCCCAGAGCGAAAAGTCGCTCGACGCTCCCGTCGGGGACGCGGACGGCCGCGCGATCGCCAAGGTCGACATGATGCCCGCCGCCGGCGCGGGCCCCGAGACGCAGATGGCCGACGAGGAGCTCCAGTCGCTCCTCAAGGACAAGCTCGCCGAGTTCCGCAAGACCCTCGCGGGCAAGGAGAAGGACGTCGCCATCTTCGACATGCGCCTCGTCGCCGACGATCCGCTCACGCTCCAGGACCTGGGCGACAAGTTCGGGATCTCGCGCGAGCGTGTCCGCCAACTCGAGCAGCGCCTGCTCGCCCGCCTAACGCTCTACGTCGTCGCCACGCCGATCGGCAACTTGGGCGATGTGACGCTGCGCGCGATCGAGGTCCTCAAGGCCTGCGATCGCGTCGCCGCAGAGGACACGCGGCAGTCGAAGAAGCTGCTCTCCCATCTCGGTATCCTTGGGAAGCCGACGACCGCCCTCCACGCCCACTCGAGCGAGCGCGACGTCGCGCAGGTCGTCGACGCGCTCGCCACAGGTGAGTCGGTCGCGCTCGTCACGGATGCGGGGACGCCGAGCGTGAGCGATCCGGGCGACGCGTTGGTGAAGGGCGCGATCGCCGCGGGGATCCGCGTCGTCCCGATCCCAGGACCGAGCGCAGCGCTCGCGGCGCTCGTCGCGAGCGGCCTCGCCGGCGGCGGGGGCTTCCGTTTCGTCGGGTTCCTCCCGCGCGAAGGCGCCGCGCGACACGAGGCGATCGGGAAGGTCTGCGCGACCCCCGAACCGGTGATCCTGTTCGAGTCCCCGGAGCGCACCGCGGCGACCCTCGCGGAGTTGGCCGACGCGACCCCCGACCGGACGGCCTGCGTCGCGCGGGAGCTCACCAAGCTCCACGAGGAGCTCGTT
PROTEIN sequence
Length: 602
MTHPLSPQLSPSATPSADAGSVALTRKRKRDRPADVSREPTVKRPQQGKTTAQGKARGAGRGKGSESPSDSEETKPREEDDEEATERDSEPAGVDDEIAGAEADDDTDAFAEPSEDEGERESGAHSGPLSKPMSSGSTERLDPMAAYLREVQRHPLLTPEQTHELAAKFVQTQDPAIAAQLVTANLRLVVKIAYEYRRAYKNIMDLVQEGNIGLMQAVKRYDPYRGVKLSSYAAWWIRAYILRFILNNWRLVKLGTTQAQRKLFFNLRKKRAELQAMGVDPTNAEIAKHLNVPESDVAEMDVRLAQSEKSLDAPVGDADGRAIAKVDMMPAAGAGPETQMADEELQSLLKDKLAEFRKTLAGKEKDVAIFDMRLVADDPLTLQDLGDKFGISRERVRQLEQRLLARLTLYVVATPIGNLGDVTLRAIEVLKACDRVAAEDTRQSKKLLSHLGILGKPTTALHAHSSERDVAQVVDALATGESVALVTDAGTPSVSDPGDALVKGAIAAGIRVVPIPGPSAALAALVASGLAGGGGFRFVGFLPREGAARHEAIGKVCATPEPVILFESPERTAATLAELADATPDRTACVARELTKLHEELV