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SCNpilot_cont_500_bf_scaffold_52967_1

Organism: SCNPILOT_EXPT_750_BF_Myxococcales_68_20

partial RP 28 / 55 MC: 2 BSCG 23 / 51 MC: 3 ASCG 5 / 38
Location: comp(2..742)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9G0E6_SORC5 similarity UNIREF
DB: UNIREF100
  • Identity: 62.7
  • Coverage: 126.0
  • Bit_score: 161
  • Evalue 1.10e-36
ECF family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily similarity KEGG
DB: KEGG
  • Identity: 62.7
  • Coverage: 126.0
  • Bit_score: 161
  • Evalue 3.30e-37
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000716}; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum (strain So ce56) (Polyangium cellulosum (strain; So ce56)).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 62.7
  • Coverage: 126.0
  • Bit_score: 161
  • Evalue 1.50e-36

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Taxonomy

Sorangium cellulosum → Sorangium → Myxococcales → Deltaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 741
ATGCCGCTCGGTCGCATCGGGTTCGGGGCCAAATACGACGAGGCCACGTCCGCACTTACCCAAAGAAGTCCGCGGTCCTTTTGTCAGAGCCTCGTGGACACGGTATCGTCGCTTGCCGCTCTCGCTTTGGGCGGCACCGCCACGGCGGAAGAGGAGACTGAGTCGTTCTTCGGTCTGCTCTCCCTCGCCGGCGGTGATGGTGGCTCGAGCACTTCCGAATCGAGCCGCCCAGAGGTCTCGCCGGTCTCGCAAACCCGACCGGCAGGGCCGCCGCCAAAGCGCTCGCGCTCGTCGCCCGCGGGGGACCCTCCCCCAGGTTCGCCGAGAGCGACCGCGAAAGCTCGCTCCGCAACGATGAAACCAACGGACCGCGACCTCGTCGAGCGCGCGAAGAACCAGGGCGATGTAGAGGCCTTCGGTCAGCTCGTCCGCCGCCATCAGCAACGCATCCACCGCCTCGCCGTTCACATGCTCCGCGACCGGGCCGAGGCGGAGGACGTCGCGCAGGAAACGTTCATCCGAGCCTACCAAGCGCTGGCGCGCTTCGACGGCCGGAGCGAGCCGTACACCTGGTTCTATCGCATCGCGATCAACCTCTCCCTCAACCGGATCCGGTCGAGGAAGGCGTCGCGAACGACGCACGACACCGACGATCCCCGTCTCGACGGCATCCTCGTCGACCGGGGGCCCGGGACCGCCGACCCCGCGCTGAGCGCGCAGCGCCAAGAGCTCTACGAGACG
PROTEIN sequence
Length: 247
MPLGRIGFGAKYDEATSALTQRSPRSFCQSLVDTVSSLAALALGGTATAEEETESFFGLLSLAGGDGGSSTSESSRPEVSPVSQTRPAGPPPKRSRSSPAGDPPPGSPRATAKARSATMKPTDRDLVERAKNQGDVEAFGQLVRRHQQRIHRLAVHMLRDRAEAEDVAQETFIRAYQALARFDGRSEPYTWFYRIAINLSLNRIRSRKASRTTHDTDDPRLDGILVDRGPGTADPALSAQRQELYET