ggKbase home page

SCNpilot_cont_500_bf_scaffold_62008_2

Organism: SCNPILOT_EXPT_750_BF_Myxococcales_68_20

partial RP 28 / 55 MC: 2 BSCG 23 / 51 MC: 3 ASCG 5 / 38
Location: comp(803..1087)

Top 3 Functional Annotations

Value Algorithm Source
Transcription elongation factor GreB n=1 Tax=Myxococcus sp. (contaminant ex DSM 436) RepID=U2SCQ0_9DELT similarity UNIREF
DB: UNIREF100
  • Identity: 57.1
  • Coverage: 91.0
  • Bit_score: 112
  • Evalue 2.80e-22
Transcription elongation factor GreB {ECO:0000256|HAMAP-Rule:MF_00930}; Transcript cleavage factor GreB {ECO:0000256|HAMAP-Rule:MF_00930}; TaxID=1297742 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Myxococcus.;" source="Myxococcus sp. (contaminant ex DSM 436).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 57.1
  • Coverage: 91.0
  • Bit_score: 112
  • Evalue 4.00e-22
hypothetical protein; K04760 transcription elongation factor GreB similarity KEGG
DB: KEGG
  • Identity: 59.3
  • Coverage: 91.0
  • Bit_score: 111
  • Evalue 2.00e-22

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Myxococcus sp. (contaminant ex DSM 436) → Myxococcus → Myxococcales → Deltaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 285
ACGAAGCGCCTCGAGAGCGCGCGCGTCGTCGAGCCGACCGATCGCCCCGACATCGAGCGTGTCTTCTTCGGCGCCACCGTCGAGATCGAAGACGAGGACGGGAAGCTCTCGACCTACACGATCGTGGGTCAGGACGAGATCGACACCGTGCGCGGCCGCATCAGCTACAAGTCGCCGCTCGCGCGTACGCTGTTGAAGCGACGCGAGGGCGACTCGTTCACGTTCAGGAAGCCCGCGGGCGAGGTGGAGCTGACGATCCTGAGCATCCGCTACGAGACGGACTGA
PROTEIN sequence
Length: 95
TKRLESARVVEPTDRPDIERVFFGATVEIEDEDGKLSTYTIVGQDEIDTVRGRISYKSPLARTLLKRREGDSFTFRKPAGEVELTILSIRYETD*