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SCNpilot_cont_500_bf_scaffold_66345_2

Organism: SCNPILOT_EXPT_750_BF_Myxococcales_68_20

partial RP 28 / 55 MC: 2 BSCG 23 / 51 MC: 3 ASCG 5 / 38
Location: comp(171..830)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor FliA n=1 Tax=Methylophaga frappieri (strain ATCC BAA-2434 / DSM 25690 / JAM7) RepID=I1YHM1_METFJ similarity UNIREF
DB: UNIREF100
  • Identity: 32.1
  • Coverage: 237.0
  • Bit_score: 108
  • Evalue 7.30e-21
RNA polymerase sigma factor for flagellar operon {ECO:0000313|EMBL:EYF05758.1}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source="Chondromyces apiculatus DSM 436.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 35.1
  • Coverage: 202.0
  • Bit_score: 113
  • Evalue 3.20e-22
RNA polymerase sigma factor for flagellar operon; K02405 RNA polymerase sigma factor for flagellar operon FliA similarity KEGG
DB: KEGG
  • Identity: 32.1
  • Coverage: 237.0
  • Bit_score: 108
  • Evalue 2.30e-21

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Taxonomy

Chondromyces apiculatus → Chondromyces → Myxococcales → Deltaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 660
ATGGAAACGCAGCCAGCCTCGTTCTCGGTCTCGAACAGCGACTTCGCCTCTCACATGCATCTCGTCCTCGGCATCGTTGCCGACTTCATGCGGCGGGTTCCGCGCAGCGTTCAGCGCGAGGACCTCGTGGCCGCAGGTTCCATGGGCCTGCTCCAGGCGCTCCGCTCGCAGAAGCACACGTGCCCGGAGATGCTCACCGCGTATGCGCGGATCCGCATCCGCGGCGCCGTCATCGACGAGCTCCGCCGTCACGACTGGTCCCCCCGGCGCCGGCGGACGTCCGGTCCGAGCGCCGTGACCAAGAGCCCGTCGCTCGTGCCGGCACCGGGCATGCCGGCGGCTGAAGAGAAGAGCGGCGTCGTCGTGATCGGCTTCGACGACCTGCCGCCGACGCACTCGCTCCGTGAGGAGGGGCCGTCGCCGCTCGAGCAGGTCGAGTTCCGGCGCTCGAGTGTGGAGGTGCGCCGCGCCGTCGACATGCTCCCGCCGCGTGAGCGCACCATCGTTCGCATGCGCTTCTTCGACGACGTGTCGAGCAAGGCCATTGCGTCGACGCTTGGATTGAGTGAAGCTCGAGTGTCGCAATTGCTGGCACGCGCGACAACGCAGCTCAAGCAGCTCCTCGCCGAGCAGCCGGATGAGTTGACTCTCGCTGCGTAG
PROTEIN sequence
Length: 220
METQPASFSVSNSDFASHMHLVLGIVADFMRRVPRSVQREDLVAAGSMGLLQALRSQKHTCPEMLTAYARIRIRGAVIDELRRHDWSPRRRRTSGPSAVTKSPSLVPAPGMPAAEEKSGVVVIGFDDLPPTHSLREEGPSPLEQVEFRRSSVEVRRAVDMLPPRERTIVRMRFFDDVSSKAIASTLGLSEARVSQLLARATTQLKQLLAEQPDELTLAA*