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SCNpilot_cont_500_bf_scaffold_37493_2

Organism: SCNpilot_P_inoc_Planctomycetales_70_10

partial RP 8 / 55 BSCG 5 / 51 ASCG 3 / 38
Location: 440..1150

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor n=1 Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1AXA4_RUBXD similarity UNIREF
DB: UNIREF100
  • Identity: 43.6
  • Coverage: 243.0
  • Bit_score: 168
  • Evalue 1.10e-38
RNA polymerase sigma-28 subunit; K03086 RNA polymerase primary sigma factor similarity KEGG
DB: KEGG
  • Identity: 43.6
  • Coverage: 243.0
  • Bit_score: 168
  • Evalue 3.40e-39
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000715}; TaxID=266117 species="Bacteria; Actinobacteria; Rubrobacteria; Rubrobacterales; Rubrobacterineae; Rubrobacteraceae; Rubrobacter.;" source="Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 43.6
  • Coverage: 243.0
  • Bit_score: 168
  • Evalue 1.50e-38

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Taxonomy

Rubrobacter xylanophilus → Rubrobacter → Rubrobacterales → Rubrobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 711
ATGACGGGCCGCAACGCGACGGTCGTCGCGAACATGGGCCTGGTCCACGAGATGGCGAAGGGCTTCCGGGGCCGGGGGCTCGACGTCGAAGACCTGGTCAACGAGGGGGCCATCGGCCTGATGCGGGCGGCCGAGAAGTTCGACCCCGAGCGGGGGTTCCGGTTCAGCACCTACGCGATGTACTGGATCAGGCAGGCCATGCAGATCGCCGTCGCCAACAAGGGCCGCACGGTCCGCGTCCCGGTCGGCACCCTGAAGCTGCTGGGCGACTGGCGGCGATCCGAGCGGGCCGTCTACCTGGCGACGGGCCGGCGCCCGGGCTTCGACGAGGTCGCCGACTGCATGGCGCTCGACGACGAGGCCAGGGTCCGCGTGGCGAAGGCCCTGGCGGCGTCCCGCGCGAGCCTGGGGAGTGAGGCCGTGGAAGTCGAGGGCGAAGGGCCGACGGCCGAGGCTTGGGACGACGAGGATCGCGCCGAGCTGGACGCGCTGATGTCGGGCCTGACCGATCGCCAGCGCGAGGTCGTATCGGCCCGGTTCGGGATCGACGGCCGCGAGCCGATGACGCTGGCCGAGGTCGGCGACGACCTGGGCGTCAGCCGCGAGCGCGTCCGGCAGATCGAGGCTGACGCCCTCCGCCGCATGGGCCTGGAGAGGTCCGGCGAGCGAGGGGCGGTGGCGTGTCGGTCGGCCGCGGGGAGGGGACGATGA
PROTEIN sequence
Length: 237
MTGRNATVVANMGLVHEMAKGFRGRGLDVEDLVNEGAIGLMRAAEKFDPERGFRFSTYAMYWIRQAMQIAVANKGRTVRVPVGTLKLLGDWRRSERAVYLATGRRPGFDEVADCMALDDEARVRVAKALAASRASLGSEAVEVEGEGPTAEAWDDEDRAELDALMSGLTDRQREVVSARFGIDGREPMTLAEVGDDLGVSRERVRQIEADALRRMGLERSGERGAVACRSAAGRGR*