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SCNpilot_cont_500_bf_scaffold_16168_4

Organism: SCNPILOT_CONT_500_P_Alphaproteobacteria_novel_41_6_7

partial RP 3 / 55 MC: 1 BSCG 8 / 51 MC: 2 ASCG 2 / 38
Location: 2274..3011

Top 3 Functional Annotations

Value Algorithm Source
tRNA pseudouridine synthase A {ECO:0000256|HAMAP-Rule:MF_00171}; EC=5.4.99.12 {ECO:0000256|HAMAP-Rule:MF_00171};; tRNA pseudouridine(38-40) synthase {ECO:0000256|HAMAP-Rule:MF_00171}; tRNA pseudouridylate synthase I {ECO:0000256|HAMAP-Rule:MF_00171}; tRNA-uridine isomerase I {ECO:0000256|HAMAP-Rule:MF_00171}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 70.2
  • Coverage: 245.0
  • Bit_score: 362
  • Evalue 5.70e-97
pseudouridylate synthase; K06173 tRNA pseudouridine38-40 synthase [EC:5.4.99.12] similarity KEGG
DB: KEGG
  • Identity: 58.4
  • Coverage: 245.0
  • Bit_score: 289
  • Evalue 1.10e-75
tRNA pseudouridine synthase A id=2744872 bin=GWC2_Alphaproteobacteria_42_16 species=Rhodospirillum centenum genus=Rhodospirillum taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Alphaproteobacteria_42_16 organism_group=Alphaproteobacteria organism_desc=Rhodospirillales related? Good + similarity UNIREF
DB: UNIREF100
  • Identity: 70.3
  • Coverage: 246.0
  • Bit_score: 362
  • Evalue 4.10e-97
  • rbh

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Taxonomy

uncultured bacterium → Bacteria

Sequences

DNA sequence
Length: 738
ATGCCACGCTTTAAGCTCACCCTTGAATATGATGGAACCCCTTTTTCGGGGTGGCAACGACAGACAGGGGTTGCAACAGTTCAAGAATCTTTAGAAGAGGCATTTGCAGATCTCCTTGGAGAACCTGCCACCGTTTGGGGAAGCGGGCGAACAGATGCAGGTGTTCATGCGAGAGGTCAAGTGGCTCATGTGGATATTGCAAAACCCTATAAGGCTTTTGCCATTCAAGGAGCTATCAATAAACGTCTGCGCCATGTGCCCATTAGTCTTTTGAACGTTGAAGAGGTTTCTCCTGATTTTCACGCCCGTTTTTCAGCAACTGCACGCATCTATGAATACATTATTTTAAATCGGAGAGCCCCTTCCGCTCTTGAAAGAACGCGAGCGTGGTGGGTTATTCATCCCCTCTCTATTGAGGCCATGGCCGAAGCTGCAACTCATCTTATCGGTCATCATGATTTTTCTTCTTTTCGCGATAGTCACTGTCAAGCGTCTTCCCCTCTTAAAACCCTTGATGTTCTTTCAGTGGAAAAAAGCGAAGGAGTTGTCCTTATTAAGGCCCGCGCCCGCTCGTTTCTCCATCATCAGGTGCGTAATATGGTGGGCACCCTGAAGCGCGTCGGTGAAGGGGTATGGACACCTGAAAAAGTTAAAGAAATTCTTGAAGCGAAAGACAGGCGCTGCGGCGGCCCCACCGCACCTGCGGAGGGGCTTTATTTGACAGAGATTTGTTATTGA
PROTEIN sequence
Length: 246
MPRFKLTLEYDGTPFSGWQRQTGVATVQESLEEAFADLLGEPATVWGSGRTDAGVHARGQVAHVDIAKPYKAFAIQGAINKRLRHVPISLLNVEEVSPDFHARFSATARIYEYIILNRRAPSALERTRAWWVIHPLSIEAMAEAATHLIGHHDFSSFRDSHCQASSPLKTLDVLSVEKSEGVVLIKARARSFLHHQVRNMVGTLKRVGEGVWTPEKVKEILEAKDRRCGGPTAPAEGLYLTEICY*