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SCNpilot_cont_500_bf_scaffold_30553_1

Organism: SCNPILOT_CONT_500_P_Alphaproteobacteria_novel_41_6_7

partial RP 3 / 55 MC: 1 BSCG 8 / 51 MC: 2 ASCG 2 / 38
Location: 3..1058

Top 3 Functional Annotations

Value Algorithm Source
Transcription-repair-coupling factor {ECO:0000256|HAMAP-Rule:MF_00969}; Short=TRCF {ECO:0000256|HAMAP-Rule:MF_00969};; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_00969};; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 80.9
  • Coverage: 350.0
  • Bit_score: 569
  • Evalue 3.40e-159
Mfd, transcription-repair coupling factor; K03723 transcription-repair coupling factor (superfamily II helicase) [EC:3.6.4.-] similarity KEGG
DB: KEGG
  • Identity: 62.7
  • Coverage: 351.0
  • Bit_score: 442
  • Evalue 1.40e-121
Transcription-repair coupling factor id=4799281 bin=GWC2_Alphaproteobacteria_42_16 species=Caenispirillum salinarum genus=Caenispirillum taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Alphaproteobacteria_42_16 organism_group=Alphaproteobacteria organism_desc=Rhodospirillales related? Good + similarity UNIREF
DB: UNIREF100
  • Identity: 80.9
  • Coverage: 350.0
  • Bit_score: 569
  • Evalue 2.40e-159

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Taxonomy

uncultured bacterium → Bacteria

Sequences

DNA sequence
Length: 1056
GTCATGCGGGAAGCCATTTTAAGGGAGCAATTCCGTGGGGGTCAAACCTTCTATGTTTGTCCACGTGTTTCCGATCTTGATAAAATCGCCGACCGCCTGCGCCAATTCGTCCCTGAAGTCAAATTTGCAGTTGCCCACGGGCAAATGACGCCAACGACCCTCGAGAACGTCATGTCCGATTTTTATGACGGTGCTTTTGATGTGCTTTTAAGCACCAACATCATCGAATCAGGCATCGACATTCCACGGGCTAACACCCTTTTGATTCACCGAGCGGACCTCTTTGGTCTGGCCCAGCTTTATCAACTCAGGGGACGCATTGGTCGCGCAAAAGTTCGAGGCTATGCCTACCTCACCTACCCCGCAGGACAAGTCCTTTCGGGGGATGCTCAAAAGCGTCTTGAAGTCATTCAATCTCTGGATACCCTTGGTGCTGGCTTTACCCTTGCGAGTCACGATATGGATATCCGCGGAACGGGCAATCTTGTGGGGGAAGAACAATCAGGCCACATCCGTGAAGTGGGGATTGAGCTTTACCAACATATGCTGGAGGAAGCCATTGCAGCTCTTAAAGCTGAAGGAAAGGGTGAAGCTTATGTTTCCACGGACTGGACCCCTCAAATCAGCCTGGGCCTTTCCGTTCTTATTCCTGAAAGTTATGTGGCTGATTTAGGCCTTCGTTTGAGCCTTTATAAGCGGTTAACTGATCTTATTACGCGAGAGGAGATTGATCAGTTTGCCATAGAGTTAATGGATCGATTTGGTCCCCTTCCCGTTGAGGTTAAAAACCTTCTCGAGGTGATTTATCTCAAATCCCTTTCCCGCCAAGCCAATGTGGATAAAGTCGAAGTTGGCCCAAAAGGCGTTCTTATTGGATTTTACAAAAATACCTTTAAAAATCCAAATGTACTCATTGGCCATATTACGAATCAAAAAGGCACGGCTAAAATCCGCCCTGATCAAAAAATTGTATATATTAGATCCCTTGAATCCTCTGAAACGCGTCTTACGGCTACCCGTAAGATATTAGAAGATCTGGTTGCGATGGCGGGGTAA
PROTEIN sequence
Length: 352
VMREAILREQFRGGQTFYVCPRVSDLDKIADRLRQFVPEVKFAVAHGQMTPTTLENVMSDFYDGAFDVLLSTNIIESGIDIPRANTLLIHRADLFGLAQLYQLRGRIGRAKVRGYAYLTYPAGQVLSGDAQKRLEVIQSLDTLGAGFTLASHDMDIRGTGNLVGEEQSGHIREVGIELYQHMLEEAIAALKAEGKGEAYVSTDWTPQISLGLSVLIPESYVADLGLRLSLYKRLTDLITREEIDQFAIELMDRFGPLPVEVKNLLEVIYLKSLSRQANVDKVEVGPKGVLIGFYKNTFKNPNVLIGHITNQKGTAKIRPDQKIVYIRSLESSETRLTATRKILEDLVAMAG*