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SCNpilot_cont_500_bf_scaffold_41256_2

Organism: SCNpilot_P_inoc_Niastella_42_33

partial RP 11 / 55 BSCG 15 / 51 ASCG 3 / 38
Location: 702..1337

Top 3 Functional Annotations

Value Algorithm Source
50S ribosomal protein L4 n=1 Tax=Segetibacter koreensis RepID=UPI0003719F00 similarity UNIREF
DB: UNIREF100
  • Identity: 80.4
  • Coverage: 209.0
  • Bit_score: 340
  • Evalue 1.40e-90
  • rbh
50S ribosomal protein L4; K02926 large subunit ribosomal protein L4 similarity KEGG
DB: KEGG
  • Identity: 79.3
  • Coverage: 208.0
  • Bit_score: 339
  • Evalue 1.00e-90
  • rbh
50S ribosomal protein L4 {ECO:0000256|HAMAP-Rule:MF_01328}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 79.3
  • Coverage: 208.0
  • Bit_score: 339
  • Evalue 4.50e-90

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Taxonomy

Chitinophaga pinensis → Chitinophaga → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 636
ATGCAAGTTGAAGTTTTAAATACACAAGGAAAGAAAACAGGCAGAACAGTGGAACTGCCCGAAGATATCTTCGGGATCGAGCCTAATAACCACGTGATCTACCTGGCAGTGAAACAATACCTCGCTGCTCAGCGTCAGGGTACACACAAAGTGAAAACCCGTGCTGAAGTGAAAGGTGCCAGCCGTAAACTGCACCGCCAGAAAGGTACAGGCGGAAGCCGTAAAGGTAATATCCGTAACCCCCTCTATAAAGGTGGTGGTACTATCTTCGGACCTAAGCCTCATGCTTACGACATTAAACTGAACCGTAAGGTGAAAGACCTGGCAAAGATCTCTGCCCTGGCTCATAAAGCGAAAGAAAACGCTATCGTAGTAGTAGAAGATATCAAACTGGATGCTCCTAAAACAAAAACATTTGTGGATATCCTGGGTAAGCTGAACGTAGCTGATAAAAAATCTATGTTCATCACTCCGGAATACAATGACAATCTCCAATTGTCTATCCGCAATGTGCCTTCTGTACTGGGTGTATTGCTGAGCGATATCAACACGTATGACATTGTTAACTCTGAAGTACTGGTACTGACAGAAAGCGCTGCCAAGATCTTCGGAGAAGAAGAAAAAGCAGAAGCGTAA
PROTEIN sequence
Length: 212
MQVEVLNTQGKKTGRTVELPEDIFGIEPNNHVIYLAVKQYLAAQRQGTHKVKTRAEVKGASRKLHRQKGTGGSRKGNIRNPLYKGGGTIFGPKPHAYDIKLNRKVKDLAKISALAHKAKENAIVVVEDIKLDAPKTKTFVDILGKLNVADKKSMFITPEYNDNLQLSIRNVPSVLGVLLSDINTYDIVNSEVLVLTESAAKIFGEEEKAEA*