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SCNpilot_cont_500_bf_scaffold_50894_2

Organism: SCNpilot_P_inoc_Niastella_42_33

partial RP 11 / 55 BSCG 15 / 51 ASCG 3 / 38
Location: 911..1285

Top 3 Functional Annotations

Value Algorithm Source
TonB-dependent outer membrane carbohydrate receptor/channel protein, SusC/RagA family n=1 Tax=Psychroflexus gondwanensis ACAM 44 RepID=N1WQ88_9FLAO similarity UNIREF
DB: UNIREF100
  • Identity: 37.3
  • Coverage: 102.0
  • Bit_score: 73
  • Evalue 1.50e-10
TonB-linked outer membrane protein, SusC/RagA family {ECO:0000313|EMBL:CEN43054.1}; TaxID=28188 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Capnocytophaga.;" source="Capnocytophaga canimorsus.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 56.5
  • Coverage: 62.0
  • Bit_score: 73
  • Evalue 2.10e-10
TonB-dependent outer membrane carbohydrate receptor/channel protein, SusC/RagA family similarity KEGG
DB: KEGG
  • Identity: 38.2
  • Coverage: 102.0
  • Bit_score: 72
  • Evalue 7.90e-11

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Taxonomy

Capnocytophaga canimorsus → Capnocytophaga → Flavobacteriales → Flavobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 375
ATGAAAGAAACACAACGGTGGAACCGGCCAGACACTGGAAGCTGTTGGCCCACCAAACGATTGCACATCATTCGAATTACCGCATTGCTGGTACTTGCTTTGCCATTAAAGATCTTTGCACACGGATTGCCGCCGGTGGGCGATCCGGCTGCTGCAATAACCAACCATTTTTTCAATGCTGAAATGGACCTCACTGTAAAAGGCACTGTAAAAAACAAAAGTGGTGCTCCCCTTGCAAATGTGAACATCACTGTAAAAGAAACGAACAAAGGTGTAACTACCGACCAGAACGGGAACTTCTCTATTGCCGCTGATCCAGGACAGGTACTTGTATTTTCATCCGTAGGATTTAAATCACAGGAAGTGAAAGTAACC
PROTEIN sequence
Length: 125
MKETQRWNRPDTGSCWPTKRLHIIRITALLVLALPLKIFAHGLPPVGDPAAAITNHFFNAEMDLTVKGTVKNKSGAPLANVNITVKETNKGVTTDQNGNFSIAADPGQVLVFSSVGFKSQEVKVT