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SCNpilot_cont_500_bf_scaffold_52811_1

Organism: SCNpilot_P_inoc_Niastella_42_33

partial RP 11 / 55 BSCG 15 / 51 ASCG 3 / 38
Location: 3..842

Top 3 Functional Annotations

Value Algorithm Source
Efflux transporter, RND family, MFP subunit n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TC41_NIAKG similarity UNIREF
DB: UNIREF100
  • Identity: 83.8
  • Coverage: 277.0
  • Bit_score: 466
  • Evalue 2.30e-128
  • rbh
RND family efflux transporter MFP subunit similarity KEGG
DB: KEGG
  • Identity: 83.8
  • Coverage: 277.0
  • Bit_score: 466
  • Evalue 7.20e-129
  • rbh
Efflux transporter, RND family, MFP subunit {ECO:0000313|EMBL:AEW00348.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 83.8
  • Coverage: 277.0
  • Bit_score: 466
  • Evalue 3.20e-128

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Taxonomy

Niastella koreensis → Niastella → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 840
GTAAAACGGGGACAAACACTTGCCATCATTGAAGCCCCAGAATTGCAAACAAAATATGCAGAGTTTCAGTCGTCTCTGCAAGCTGCAAAAGCAAAATACCTGAGCAGTATGGATGTTTATCAACGCCTTTCCAAAGCAGCCCAGGCGAAAACACCGGGCATTGTAACGCCTGTTGATCTTGAACGTAGCCGGAACCAGTACCTCGCTGACAGTGCCAGCTATGAAGCTGCACACCTGCTGGCCCAATCTTACAAAGAAGTTGCGGGCTACCTTGTGCTTCATGCTCCTTTTGATGGCGTTGTTACAGCCCGGAAAGCTGACAGGGGAACATTGGTAGGTAACAATCAGGCAATCCTGACCATACAGCATAATGGCAAACTCAGGTTAAGAGTAGCAGTGCCTGAATTATATATTGCATCCGGAGCTGTTTCCAAAACAGCTCCTTTTAGAGTAGACGCATATCCCAATAAATTATTTCAAGCGGCCCTTGCCCGGAAAAGCGAAAGCATTGATCCACAAACAAGAACGGAAACCTGGGAATACATCTATGATAATAAAAGTCATGATCTGAAAGCCGGTTCCTTTGCTTATGTAAAACTGGAATTACAAAGAACTGGCAATTCGTTTATTGTTCCTCCTTCTGCTATTGTTACCAATCAGGAACGGAAATTTGTTATCGGGGTGAAGGATGGGAAAGCAGTCTGGATCGATGTGAGGCAGGGGATGTCTACTGATAAGGGCATAGAGGTATTTGGGAATCTCAGTAATAATGACACCATCGTGGTTAGGGCTACTGATGAGAGGAAACCTGGAAGTACTGCCATTTGGAAAGAGAAATAA
PROTEIN sequence
Length: 280
VKRGQTLAIIEAPELQTKYAEFQSSLQAAKAKYLSSMDVYQRLSKAAQAKTPGIVTPVDLERSRNQYLADSASYEAAHLLAQSYKEVAGYLVLHAPFDGVVTARKADRGTLVGNNQAILTIQHNGKLRLRVAVPELYIASGAVSKTAPFRVDAYPNKLFQAALARKSESIDPQTRTETWEYIYDNKSHDLKAGSFAYVKLELQRTGNSFIVPPSAIVTNQERKFVIGVKDGKAVWIDVRQGMSTDKGIEVFGNLSNNDTIVVRATDERKPGSTAIWKEK*