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SCNpilot_cont_500_bf_scaffold_35709_1

Organism: SCNPILOT_EXPT_750_P_Actinomycetales_72_13

partial RP 7 / 55 BSCG 8 / 51 ASCG 3 / 38
Location: 2..358

Top 3 Functional Annotations

Value Algorithm Source
aroA; 3-phosphoshikimate 1-carboxyvinyltransferase (EC:2.5.1.19) similarity KEGG
DB: KEGG
  • Identity: 67.5
  • Coverage: 120.0
  • Bit_score: 168
  • Evalue 1.30e-39
3-phosphoshikimate 1-carboxyvinyltransferase {ECO:0000256|HAMAP-Rule:MF_00210, ECO:0000256|RuleBase:RU000531}; EC=2.5.1.19 {ECO:0000256|HAMAP-Rule:MF_00210, ECO:0000256|RuleBase:RU000531};; 5-enolpyruvylshikimate-3-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00210}; TaxID=1097677 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Clavibacter.;" source="Clavibacter michiganensis subsp. nebraskensis NCPPB 2581.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 67.5
  • Coverage: 120.0
  • Bit_score: 168
  • Evalue 5.90e-39
hypothetical protein n=1 Tax=Microbacterium yannicii RepID=UPI00031C5ECD similarity UNIREF
DB: UNIREF100
  • Identity: 68.6
  • Coverage: 118.0
  • Bit_score: 168
  • Evalue 3.20e-39

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Taxonomy

Clavibacter michiganensis → Clavibacter → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 357
GGCGAGCTCGCGCCGACGCTCGTCGCGCTCGCCGCGCTCGCGGCCGGCCCGTCGCGCTTCACCGGGATCGGGCACCTGCGGGGCCACGAGACGGACCGGATCGCCGCTCTCGTCGCCGATCTGCGGGCGCTCGGCGCCGGGGCCGAGGAGCTCCCCGACGGCATCGCGGTCGAGCCCCGCCCGCTGCACGGCGGCGACTGGGGCGCCTACCAGGACCACCGGATGGCGACCAGCGGCGCGCTGCTCGGCCTCGCCGTGCCCGAGGTGCGGGTCGACGACATCGGCTCGACCTCGAAGACGCTGCCGGAGTTCGCCGCCCTCTGGGCGCGCATGCTCGCCGTCCCCGGGGCGGCATGA
PROTEIN sequence
Length: 119
GELAPTLVALAALAAGPSRFTGIGHLRGHETDRIAALVADLRALGAGAEELPDGIAVEPRPLHGGDWGAYQDHRMATSGALLGLAVPEVRVDDIGSTSKTLPEFAALWARMLAVPGAA*