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SCNpilot_cont_750_bf_scaffold_150_10

Organism: SCNPILOT_CONT_300_BF_Rhizobiales_59_19

near complete RP 51 / 55 MC: 2 BSCG 51 / 51 MC: 2 ASCG 14 / 38 MC: 1
Location: 9630..10220

Top 3 Functional Annotations

Value Algorithm Source
Sigma-54 factor, interaction region n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LFZ9_RHITR similarity UNIREF
DB: UNIREF100
  • Identity: 79.0
  • Coverage: 186.0
  • Bit_score: 280
  • Evalue 1.30e-72
sigma-54 factor, interaction region similarity KEGG
DB: KEGG
  • Identity: 79.0
  • Coverage: 186.0
  • Bit_score: 280
  • Evalue 3.90e-73
Sigma-54 factor, interaction region {ECO:0000313|EMBL:AGB69596.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 79.0
  • Coverage: 186.0
  • Bit_score: 280
  • Evalue 1.80e-72

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Taxonomy

Rhizobium tropici → Rhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 591
ATGATGAAGCAGCCGGCTTTCACCTCAGCCTATCAGATCTCGGCGGCCCGGGCGGCGGGCGAGCTCAAGACGAAGACATTGCTGCGCGCCTTCGTGAGCCGGCTTCGCACTGTTTTCTCCGATGAGGGTGTGGAGCTGTCTGCCACATTCGTCGGCGGGGCTTACCCGCATGTTCTTGTTTGCGATCAGGCCGACGAGGCGGTTGGCCGCGTCACCATAGATGCCGAGACCGGCCTTTATGTCCTCTGCGAACTCGGCGGTCATGCCGATGACGTCGTCATCGTAACCGCGAGTGACAATCGATTGATCGAGGAGATCGCCCTCCATCTTGGTGACGGCCCTTTGCCGCAGGCCGCGGTCGATGCCGCCGTCTGCAGCCTTGTCGGCCAGACGATGGAGGATGTCGAGCGCAAGCTCATTCTCCAGACGCTGCACCATTGCGATGGCGATCCCACGCATACGGCGTTCATGCTCGGCATGCCGCTTGTCACCCTCTACAACAAGCTGGCGGTCTATTTCTCGGACTCGGCCGGTGAACGGCAGCAGGCTGCCGTGGATATGGGATACGGAGCGAAACGCTACCGGCTATGA
PROTEIN sequence
Length: 197
MMKQPAFTSAYQISAARAAGELKTKTLLRAFVSRLRTVFSDEGVELSATFVGGAYPHVLVCDQADEAVGRVTIDAETGLYVLCELGGHADDVVIVTASDNRLIEEIALHLGDGPLPQAAVDAAVCSLVGQTMEDVERKLILQTLHHCDGDPTHTAFMLGMPLVTLYNKLAVYFSDSAGERQQAAVDMGYGAKRYRL*