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SCNpilot_cont_750_bf_scaffold_573_34

Organism: SCNPILOT_CONT_300_BF_Novosphingobium_63_714

near complete RP 50 / 55 MC: 1 BSCG 51 / 51 ASCG 11 / 38
Location: comp(37359..41636)

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase subunit beta' (EC:2.7.7.6); K03046 DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] similarity KEGG
DB: KEGG
  • Identity: 92.8
  • Coverage: 999.99
  • Bit_score: 2627
  • Evalue 0.0
  • rbh
DNA-directed RNA polymerase subunit beta' {ECO:0000255|HAMAP-Rule:MF_01322}; Short=RNAP subunit beta' {ECO:0000255|HAMAP-Rule:MF_01322};; EC=2.7.7.6 {ECO:0000255|HAMAP-Rule:MF_01322};; RNA polymerase subunit beta' {ECO:0000255|HAMAP-Rule:MF_01322}; Transcriptase subunit beta' {ECO:0000255|HAMAP-Rule:MF_01322}; TaxID=279238 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium aromaticivorans (strain DSM 12444 / F199).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 92.8
  • Coverage: 999.99
  • Bit_score: 2627
  • Evalue 0.0
DNA-directed RNA polymerase subunit beta' n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=RPOC_NOVAD similarity UNIREF
DB: UNIREF100
  • Identity: 92.8
  • Coverage: 999.99
  • Bit_score: 2627
  • Evalue 0.0
  • rbh

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Taxonomy

Novosphingobium aromaticivorans → Novosphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 4278
ATGAACGACCTGACCAAATTTACCAATCAGATGGCGAAGCCGGAAACCTTCGACCAGATCCAGATCGGTCTGGCCTCGCCCGAGCGCATCCGCAGCTGGTCCTTCGGCGAGATCAAGAAGCCGGAAACGATAAACTATCGCACGTTCAAGCCCGAGCGTGACGGCCTGTTCTGCGCGCGTATCTTCGGCCCCGTTAAGGACTATGAGTGCCTTTGCGGTAAGTATAAGCGCATGAAGTACAAGGGCGTCGTCTGCGAAAAGTGCGGCGTCGAAGTGACCGTGACCAAGGTGCGCCGCGAGCGCATGGGCCATATCGAACTGGCCGCGCCGGTCGCGCATATCTGGTTCCTCAAGTCACTGCCTTCGCGCATCGGTCTGCTGCTCGACATGCAGTTGAAGCAGCTCGAACGCATCCTGTACTTTGAATCCTATGTGGTGATCGAGCCGGGCCTGACCCCGCTTGAAAAGTACCAGTTGCTGACCGAGGACGAGCTGCTCGACTATCAGGACGAGTATGGCGAAGACGCGTTCAGCGCCGGCATCGGTGCCGAGGCGGTCAAGCACATGCTGATGAGCCTCGACATGGTTCAGGAGAAGGAAGACCTTCTCAAGGAACTGGCCGAGACCAAGTCGGAACTGAAGCCTAAGAAGATCATCAAGCGCCTGAAGGTCGTGGAATCCTTCATCGATTCGGGCAACCGCCCCGAATGGATGATCCTCGACGTGGTGCCGGTCATTCCGCCAGACCTGCGCCCGCTGGTGCCGCTGGACGGTGGCCGCTTTGCGACCTCGGACTTGAACGACCTCTATCGTCGCGTCATCAACCGTAACAACCGTCTGAAGCGCCTCATTGAACTGCGCGCGCCCGACATCATCGTGCGCAACGAAAAGCGCATGTTGCAGGAAGCCGTTGACGCCCTGTTCGACAACGGCCGCCGTGGCCGCGTCATCACGGGTGCCAACAAGCGTCCTCTCAAGTCGCTGTCCGACATGCTCAAGGGCAAGCAGGGCCGCTTCCGTCAGAACCTGCTCGGCAAGCGCGTCGACTATTCGGGCCGTTCGGTCATCGTGACCGGGCCGGAACTCAAGCTGCACCAGTGCGGCCTGCCCAAGAAGATGGCGCTCGAACTGTTCAAGCCGTTCATCTACGCACGTCTGGATGCCAAGGGTCTGTCGATGACCCTGAAGCAGGCCAAGAAGTGGGTGGAAAAGGAACGCAAGGAAGTCTGGGACATCCTGGACGAGGTGATCCGTGAACACCCCGTCATGCTCAACCGTGCGCCCACGCTGCACCGTCTGGGCATTCAGGCGTTTGAACCCGTTCTGATCGAGGGCAAGGCGATCCAGCTTCACCCCCTGGTCTGCTCGGCCTTCAACGCCGACTTCGACGGTGACCAGATGGCCGTCCACGTTCCGCTGAGCCTTGAGGCCCAGTTGGAAGCGCGCGTGCTGATGATGTCGACCAACAACATCCTCTCGCCCGCGAACGGCAAGCCGATCATCGTGCCTTCGCAGGACATGGTGCTGGGCATCTATTACCTCTCGATGGACCGAGCAGGCGAGCCGGGCGAGGGTATGCTGCTGGCCGATATGGCCGAAGTGCATCAGGCGCTGGAGGCCAAGGCCGTCACGCTGCACTCGAAGGTCATCGCCCGCGTTCCGCAGACCGACGAAGACGGCAAAACGTACCTGAAGCGTTTCGAAACGACTCCGGGCCGTATGCTGATCGGCGAATGCCTGCCCAAGAGCCACAAGGTGCCCTTCGACGTCGTCAACCGCCTGCTGACCAAGAAGGACGTGGGCGACGTGATCGACGAGGTCTATCGTCACACCGGCCAGAAGGACACGGTGCTGTTCGCCGACGCCATCATGAGCCTCGGCTTCCGCCACGCGTTCAAGGCAGGCATCTCCTTCGGCAAGGATGACATGATCATCCCGGATTCGAAGGATGCGCTGGTGGCCGAGACCAAGGAACTGGTCGCGGATTACGAGCAGCAGTATCAGGACGGTCTGATCACGCAGCAGGAAAAGTACAACAAGGTCATCGACGCCTGGAGCCGTTGCGGCGATCAGGTGGCCGCGGCCATGATGGAAGAGCTGAAGTCCAGCCCTATGGACCCCGAGACCGGCCGTCAGAAGCCGATCAACGCGATCTACATGATGAGCCACTCGGGCGCGCGTGGTTCGCCGACCCAGATGAAGCAGCTGGCCGGTATGCGCGGTCTGATGGCCAAGCCGTCGGGCGAGATCATCGAAACGCCGATCATCTCGAACTTCAAGGAAGGTCTGACCGTTCTTGAATACTTCAACTCGACCCACGGCGCCCGTAAGGGTCTGGCGGACACCGCGCTCAAGACGGCGAACTCGGGTTACCTGACCCGCCGTCTGGTCGACGTGTCGCAGGACTGCGTGGTCATCATCAATGACTGCGGCACCGAACGCGCTCTGGAAATGCGCGCGATCGTTCAGGGCGGCAGCACCATCGCCTCGCTGGGCGAGCGTATCCTCGGTCGTACTCTGGCCGACGATATCCTTGCCAAGGATGGCTCGGTGATCGTGGGCAAGGGCACGCTGCTGGACGAACCGGCGGTGGCGCTGATCGAATCGCATGGCATCCAGTCGGCGCGCATCCGCTCGCCGCTGGTCTGCGAGGCGACCCAGGGCGTTTGCGGCACCTGCTATGGCCGTGACCTTGCGCGCGGTACGCCGGTCAACATCGGTGAAGCGGTTGGCGTTATCGCCGCCCAGTCGATCGGTGAGCCCGGCACGCAGCTGACCATGCGTACGTTCCACATCGGTGGCGCGGCGCAGGTGAACGAACAGTCGAACCTTGAAGCGTTGTGCGACGGTCACGTCGAATATCGCGACATCCCGACCATCGTGGACAAGCGCGGCCGTCTGCTCAGCCTGGCCCGCAATGGCGAAATCGCGCTGATCGACACCGATGGCCGCGAGCGCGCCATGCACCGTGTGCCTTATGGTACGCATCTGCTCCACAAGAGCGGCGCGACCGTGAAGCAGGGTGAACGTCTGGCCGAATGGGATCCGTTCACCACGCCGATCATCACCGAAAAGTCGGGCAGCGTGAAGTATCAGGACCTGATTGACGGCCGCACGTTGACCGAGCAGGTGGACGAAGCGACGGGTATGACCCAGCGCATCATCACCGAAAACCGCTCGACCAGCCGCGGCAAGAAGGAGGACCTGCGTCCCCGTCTGACCCTGCTGGACGAAGGTTCGGGCGAGGCTGCACGCTATATGCTGGCGCCGGGCACGACGCTTTCGGTCGAAGACGGTCAGTTCGTGGAATCGGGCGACGTTATCGCGCGTGCTTCGCGCGAAGCTGCCAAGACCCGCGACATCACCGGCGGTCTGCCGCGTGTGGCCGAACTGTTCGAAGCGCGCATTCCCAAGGACAATGCGGTGATCGCCAAGATCGCCGGCCGCATTGAATTTGTCCGCGATTACAAGGCGAAGCGTAAGATTGCCATTGTGCCGCAGGAAGGCGAACCCGTCGAATACCTGATCCCCAAGAGCAAGGTGATCGACGTTCAGGAAGGCGACTGGGTCAAGAAGGGCGACAACCTGATCTCGGGCTCGCCCAACCCGCATGACATTCTGGAAGTGATGGGGATCGAGGCTCTGGCCGAATATCTCGTCGCGGAAATTCAGGAAGTCTATCGCTTGCAGGGCGTGAAGATCAACGACAAGCACATCGAGGTGATCGTTCGCCAGATGCTGCAAAAGGTTGAAATCACGTTTGGTGGCGACACCACGCTGCTGCCGGGCGAGCAGGTCGATCTGGAAGAAATGCTGGAAACCAACGGCAAGCTGACCGAAGGCCAGCGTCCCGCCGAAGGCAAGCCGGTGCTGCTGGGCATCACCAAGGCTTCGCTCCAGACGCGTTCGTTCATCTCGGCGGCGTCCTTCCAGGAAACCACCCGCGTGCTCACGCAGGCGGCGGTCGAAGGCAAGAGGGACAGCCTGATCGGTCTGAAGGAAAACGTCATCGTGGGTCGTCTCATCCCCGCCGGTACCGGCGCGGGCATGAACCGTATCCGCGTGGCCGCCTCCAGCCGCGATGCTGCGCTGCGCGCCTCGTATCGCAAGCTGCAGGAGCACCTGATCGCTCCGGCAACGGCGGCCGAAGAGCACGCGGCCGAACTGGCACAGGGGCCTGAGGCCGCTGGTCTGGTCGATCCGCTGGCGCCGATGGAAGGGGAAACCCACGGCCTCGACGCCGATGCCGGTGAATACCTGAACAAGGGCGAGGAATAA
PROTEIN sequence
Length: 1426
MNDLTKFTNQMAKPETFDQIQIGLASPERIRSWSFGEIKKPETINYRTFKPERDGLFCARIFGPVKDYECLCGKYKRMKYKGVVCEKCGVEVTVTKVRRERMGHIELAAPVAHIWFLKSLPSRIGLLLDMQLKQLERILYFESYVVIEPGLTPLEKYQLLTEDELLDYQDEYGEDAFSAGIGAEAVKHMLMSLDMVQEKEDLLKELAETKSELKPKKIIKRLKVVESFIDSGNRPEWMILDVVPVIPPDLRPLVPLDGGRFATSDLNDLYRRVINRNNRLKRLIELRAPDIIVRNEKRMLQEAVDALFDNGRRGRVITGANKRPLKSLSDMLKGKQGRFRQNLLGKRVDYSGRSVIVTGPELKLHQCGLPKKMALELFKPFIYARLDAKGLSMTLKQAKKWVEKERKEVWDILDEVIREHPVMLNRAPTLHRLGIQAFEPVLIEGKAIQLHPLVCSAFNADFDGDQMAVHVPLSLEAQLEARVLMMSTNNILSPANGKPIIVPSQDMVLGIYYLSMDRAGEPGEGMLLADMAEVHQALEAKAVTLHSKVIARVPQTDEDGKTYLKRFETTPGRMLIGECLPKSHKVPFDVVNRLLTKKDVGDVIDEVYRHTGQKDTVLFADAIMSLGFRHAFKAGISFGKDDMIIPDSKDALVAETKELVADYEQQYQDGLITQQEKYNKVIDAWSRCGDQVAAAMMEELKSSPMDPETGRQKPINAIYMMSHSGARGSPTQMKQLAGMRGLMAKPSGEIIETPIISNFKEGLTVLEYFNSTHGARKGLADTALKTANSGYLTRRLVDVSQDCVVIINDCGTERALEMRAIVQGGSTIASLGERILGRTLADDILAKDGSVIVGKGTLLDEPAVALIESHGIQSARIRSPLVCEATQGVCGTCYGRDLARGTPVNIGEAVGVIAAQSIGEPGTQLTMRTFHIGGAAQVNEQSNLEALCDGHVEYRDIPTIVDKRGRLLSLARNGEIALIDTDGRERAMHRVPYGTHLLHKSGATVKQGERLAEWDPFTTPIITEKSGSVKYQDLIDGRTLTEQVDEATGMTQRIITENRSTSRGKKEDLRPRLTLLDEGSGEAARYMLAPGTTLSVEDGQFVESGDVIARASREAAKTRDITGGLPRVAELFEARIPKDNAVIAKIAGRIEFVRDYKAKRKIAIVPQEGEPVEYLIPKSKVIDVQEGDWVKKGDNLISGSPNPHDILEVMGIEALAEYLVAEIQEVYRLQGVKINDKHIEVIVRQMLQKVEITFGGDTTLLPGEQVDLEEMLETNGKLTEGQRPAEGKPVLLGITKASLQTRSFISAASFQETTRVLTQAAVEGKRDSLIGLKENVIVGRLIPAGTGAGMNRIRVAASSRDAALRASYRKLQEHLIAPATAAEEHAAELAQGPEAAGLVDPLAPMEGETHGLDADAGEYLNKGEE*