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SCNpilot_cont_750_bf_scaffold_525_16

Organism: SCNPILOT_CONT_300_BF_Sphingomonadales_67_36

near complete RP 50 / 55 MC: 2 BSCG 49 / 51 MC: 1 ASCG 11 / 38
Location: comp(14944..16257)

Top 3 Functional Annotations

Value Algorithm Source
Ribosomal protein S12 methylthiotransferase RimO {ECO:0000256|HAMAP-Rule:MF_01865, ECO:0000256|SAAS:SAAS00083292}; Short=S12 MTTase {ECO:0000256|HAMAP-Rule:MF_01865};; Short=S12 methylthiotransferase {ECO:0000256|HAMAP-Rule:MF_01865};; EC=2.8.4.4 {ECO:0000256|HAMAP-Rule:MF_01865, ECO:0000256|SAAS:SAAS00179441};; Ribosomal protein S12 (aspartate-C(3))-methylthiotransferase {ECO:0000256|HAMAP-Rule:MF_01865}; Ribosome maturation factor RimO {ECO:0000256|HAMAP-Rule:MF_01865}; TaxID=1549858 species="Bacteria; Pr similarity UNIPROT
DB: UniProtKB
  • Identity: 90.1
  • Coverage: 434.0
  • Bit_score: 787
  • Evalue 1.30e-224
rimO; ribosomal protein S12 methylthiotransferase; K14441 ribosomal protein S12 methylthiotransferase [EC:2.-.-.-] similarity KEGG
DB: KEGG
  • Identity: 86.7
  • Coverage: 436.0
  • Bit_score: 755
  • Evalue 9.30e-216
  • rbh
ribosomal protein S12 methylthiotransferase n=1 Tax=Sphingomonas phyllosphaerae RepID=UPI0003B7685A similarity UNIREF
DB: UNIREF100
  • Identity: 88.8
  • Coverage: 436.0
  • Bit_score: 781
  • Evalue 3.80e-223
  • rbh

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Taxonomy

Sphingomonas taxi → Sphingomonas → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1314
ATGGCGACAAAACTCCCCTCCCCGCCCCGCGTGGGCATGGTCTCGCTCGGCTGCCCGAAGAACCTTGTCGACAGTGAGCGCATCCTGACCCAGCTTCGCGCCGACGGTTATCAGATGTCGGCCGACTATGCCGGCGCGGACGTGGTGCTGGTCAACACCTGCGGCTTCCTCGATTCGGCGAAGGAGGAGAGCCTGGAGGCGATCGGCGAGGCGATCGCGGAGAACGGCCGCGTCATCGTCACCGGCTGCATGGGCAAGGAAGCCGAGCTGATCCGCGCGCGCTTCCCCGATGTGCTCGCCGTCACCGGCGCGCATCAGTACGAGCAGGTGGTGGAAGCGGTGCACGACGCCGCGCCCGCCAACATCTCGCCCTACGTCGATCTGATCCCGGACGCCGGGCTGAAGCTCACCCCGCGCCATTACAGCTACCTGAAGATTTCGGAGGGCTGCAACCACCGCTGCGCCTTCTGCATCATCCCCTCGCTGCGCGGCGATCTCGTCAGCCGCCGCCCGGACGCGATCCTGCGCGAGGCGGAAAAGCTGGTCGCGGCCGGCACGAAGGAGCTGCTTGTCATCAGCCAGGACACCTCAGCCTATGGGGTGGACCTGCGCCACAAGGCTTGGCCGTGGAAGGGCGGAGAGGTGCGCTCGCACATGACCGACCTCGCCCGCGAACTGGGCCGGATCGCGCCATGGGTGCGGCTGCATTACGTCTATCCCTACCCGCACGTCGATCAGGTGATCCCGCTGATGGCGGAGGGGCTGGTGCTGCCCTATCTCGACATCCCCTTCCAGCACGCCAGCCGCGCGGTGCTGAAGGCGATGAAGCGCCCCGCCAACGAAGCGAAGGTGCTGGAGCGCATCCGCGGCTGGCGCGAGATCTGCCCGGACATCGCGATCCGCTCGACCTTCGTGGTCGGCTTCCCGGGCGAGACGGAGGACGATTTCCGTTATCTGCTCGACTGGCTGGACGAGGCGCAGCTCGATCGCGTCGGTGCGTTCCGCTTCGAGCCGGTCGAGGGCGCGGCGGCCAATGCGCTGCCCGATCCGGTGCCGGACGCGGTGAAGGAGGAGCGCTACGCCCGCGTGATGGAAAAGACCGCCGCCATCTCCGCCGCGAAGCTCGCGGCGAAGGTGGGCCGCACGCTGGATGTGATCATCGACGCGGTGGGTGAAGAAGGCGCAACCGGCCGCTCCTATGCCGATGCGCCGGAGATCGACGGCGAGGTGCATCTGCGCGATGCCGGCCATCTGTCGCCGGGCGATATCGTGCGGGTGACGATCGAGGACGCCGACGAGCACGGGGCGGAGTAG
PROTEIN sequence
Length: 438
MATKLPSPPRVGMVSLGCPKNLVDSERILTQLRADGYQMSADYAGADVVLVNTCGFLDSAKEESLEAIGEAIAENGRVIVTGCMGKEAELIRARFPDVLAVTGAHQYEQVVEAVHDAAPANISPYVDLIPDAGLKLTPRHYSYLKISEGCNHRCAFCIIPSLRGDLVSRRPDAILREAEKLVAAGTKELLVISQDTSAYGVDLRHKAWPWKGGEVRSHMTDLARELGRIAPWVRLHYVYPYPHVDQVIPLMAEGLVLPYLDIPFQHASRAVLKAMKRPANEAKVLERIRGWREICPDIAIRSTFVVGFPGETEDDFRYLLDWLDEAQLDRVGAFRFEPVEGAAANALPDPVPDAVKEERYARVMEKTAAISAAKLAAKVGRTLDVIIDAVGEEGATGRSYADAPEIDGEVHLRDAGHLSPGDIVRVTIEDADEHGAE*