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SCNpilot_cont_750_bf_scaffold_525_22

Organism: SCNPILOT_CONT_300_BF_Sphingomonadales_67_36

near complete RP 50 / 55 MC: 2 BSCG 49 / 51 MC: 1 ASCG 11 / 38
Location: comp(20465..20914)

Top 3 Functional Annotations

Value Algorithm Source
30S ribosomal protein S1 n=1 Tax=Sphingomonas sp. S17 RepID=F3WZK0_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 92.6
  • Coverage: 149.0
  • Bit_score: 267
  • Evalue 8.30e-69
30S ribosomal protein S1 {ECO:0000256|PIRNR:PIRNR002111}; TaxID=1219050 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas paucimobilis NBRC 13935.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 92.6
  • Coverage: 149.0
  • Bit_score: 267
  • Evalue 1.20e-68
30S ribosomal protein S1; K02945 small subunit ribosomal protein S1 similarity KEGG
DB: KEGG
  • Identity: 85.7
  • Coverage: 147.0
  • Bit_score: 246
  • Evalue 4.80e-63

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Taxonomy

Sphingomonas paucimobilis → Sphingomonas → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 450
ATGGTCCAGGCCATCGTGCTCGACATCGATCCGGAGAAGGAGCGCATCTCGCTCGGCATGAAGCAGCTTGAGCGCGGCGGCCCGGTGGCCGGCGCCGTGGCGGCGGGCGAGCGCCTGTCGAAGAACGCGGTCGTCACCGTCACCATCCTCGAAGTCCGCGACGCGGGCCTCGAGGTGCAGGCGGGCGACGACGGCGCGACCGGCTTCATCAAGCGCACCGACCTCGGCCGCGATCGCGACGAGCAGCGTCCGGAGCGTTTCCAGGTCGGCCAGAAGCTCGATGCGATGGTGACCGGCTTCGATCGTTCGAAGAAGCCGACCTTCTCGGTCAAGGCGATGCAGATCGCCGAGGAGAAGCAGGCCGTGGCGCAGTATGGTTCGTCCGATTCGGGCGCGTCGCTGGGCGACATCCTGGGCGAGGCGCTCAAGGCTCGCGAATCGAAGAAGTGA
PROTEIN sequence
Length: 150
MVQAIVLDIDPEKERISLGMKQLERGGPVAGAVAAGERLSKNAVVTVTILEVRDAGLEVQAGDDGATGFIKRTDLGRDRDEQRPERFQVGQKLDAMVTGFDRSKKPTFSVKAMQIAEEKQAVAQYGSSDSGASLGDILGEALKARESKK*