ggKbase home page

SCNpilot_cont_750_bf_scaffold_529

Search features with annotation key words

Displaying items 31-54 of 54 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_750_bf_scaffold_529_31
Blastococcus saxobsidens, Blastococcus, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

25167..25970
DNA (804bp) protein (268aa)
Uncharacterized protein n=1 Tax=Blastococcus saxobsidens (strain DD2) RepID=H6RKJ0_BLASD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCG02409.1}; TaxID=1146883 species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Blastococcus.;" source="Blastococcus saxobsidens (strain DD2).;"
SCNpilot_cont_750_bf_scaffold_529_32
Amycolatopsis mediterranei, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

25970..26599
DNA (630bp) protein (210aa)
SAF domain-containing protein n=3 Tax=Amycolatopsis mediterranei RepID=D8I537_AMYMU
SAF domain-containing protein
SAF domain-containing protein {ECO:0000313|EMBL:AEK45756.1}; TaxID=713604 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis mediterranei (strain S699) (Nocardia mediterranei).;"
SCNpilot_cont_750_bf_scaffold_529_33
Geodermatophilus obscurus, Geodermatophilus, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

26603..27334
DNA (732bp) protein (244aa)
Uncharacterized protein n=1 Tax=Geodermatophilus obscurus (strain ATCC 25078 / DSM 43160 / JCM 3152 / G-20) RepID=D2S7E7_GEOOG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADB73447.1}; TaxID=526225 species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Geodermatophilus.;" source="Geodermatophilus obscurus (strain ATCC 25078 / DSM 43160 / JCM 3152 /; G-20).;"
SCNpilot_cont_750_bf_scaffold_529_34
Cellulomonas carbonis, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

27331..28701
DNA (1371bp) protein (457aa)
Flp pilus assembly protein, ATPase CpaF n=1 Tax=Modestobacter marinus (strain BC501) RepID=I4EUQ4_MODMB
ATP/GTP-binding protein {ECO:0000313|EMBL:KGM11879.1}; TaxID=947969 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellulomonas carbonis T26.;"
flp pilus assembly protein, ATPase CpaF
SCNpilot_cont_750_bf_scaffold_529_35
Intrasporangium chromatireducens, Intrasporangium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

28698..29603
DNA (906bp) protein (302aa)
Type II secretion system protein n=1 Tax=Nocardioides sp. CF8 RepID=R7XXG9_9ACTO
Membrane protein {ECO:0000313|EMBL:EWT06790.1}; TaxID=584657 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Intrasporangium.;" source="Intrasporangium chromatireducens Q5-1.;"
type II secretion system F domain-containing protein
SCNpilot_cont_750_bf_scaffold_529_36
Amycolatopsis decaplanina, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

29600..30487
DNA (888bp) protein (296aa)
Type II secretion system protein n=1 Tax=Amycolatopsis decaplanina DSM 44594 RepID=M2YA02_9PSEU
Type II secretion system protein {ECO:0000313|EMBL:EME51727.1}; TaxID=1284240 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis decaplanina DSM 44594.;"
type II secretion system protein
SCNpilot_cont_750_bf_scaffold_529_37
unknown

Not on your lists

30513..30716
DNA (204bp) protein (68aa)

This feature has no annotations

SCNpilot_cont_750_bf_scaffold_529_38
unknown

Not on your lists

30729..31121
DNA (393bp) protein (131aa)
hypothetical protein n=1 Tax=Streptomyces sp. FxanaD5 RepID=UPI00036C910C
hypothetical protein
SCNpilot_cont_750_bf_scaffold_529_39
Streptomyces sp. MNU77, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

31118..31564
DNA (447bp) protein (149aa)
UPI0003D7CD6A related cluster n=1 Tax=unknown RepID=UPI0003D7CD6A
Membrane protein {ECO:0000313|EMBL:KIZ20192.1}; TaxID=1573406 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. MNU77.;"
hypothetical protein
SCNpilot_cont_750_bf_scaffold_529_40
Geodermatophilus obscurus, Geodermatophilus, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

31561..31983
DNA (423bp) protein (141aa)
Uncharacterized protein n=1 Tax=Geodermatophilus obscurus (strain ATCC 25078 / DSM 43160 / JCM 3152 / G-20) RepID=D2S7F4_GEOOG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADB73454.1}; TaxID=526225 species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Geodermatophilus.;" source="Geodermatophilus obscurus (strain ATCC 25078 / DSM 43160 / JCM 3152 /; G-20).;"
SCNpilot_cont_750_bf_scaffold_529_41
Blastococcus saxobsidens, Blastococcus, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

31980..35000
DNA (3021bp) protein (1007aa)
Uncharacterized protein n=1 Tax=Blastococcus saxobsidens (strain DD2) RepID=H6RKK0_BLASD rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:CCG02419.1}; TaxID=1146883 species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Blastococcus.;" source="Blastococcus saxobsidens (strain DD2).;"
SCNpilot_cont_750_bf_scaffold_529_42
Streptomyces sp. MNU77, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

34997..35623
DNA (627bp) protein (209aa)
hypothetical protein n=1 Tax=Streptomyces vitaminophilus RepID=UPI0003752882
Uncharacterized protein {ECO:0000313|EMBL:KIZ20304.1}; TaxID=1573406 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. MNU77.;"
peptidase A24A prepilin type IV
SCNpilot_cont_750_bf_scaffold_529_43
unknown

Not on your lists

comp(35572..36348)
DNA (777bp) protein (259aa)

This feature has no annotations

SCNpilot_cont_750_bf_scaffold_529_44
unknown

Not on your lists

comp(36353..37021)
DNA (669bp) protein (223aa)

This feature has no annotations

SCNpilot_cont_750_bf_scaffold_529_45
Amycolatopsis orientalis, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(37055..38428)
DNA (1374bp) protein (458aa)
Relaxase/mobilization nuclease family protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F2L6Y6_PSEUX
Uncharacterized protein {ECO:0000313|EMBL:AHJ58526.1}; TaxID=1156913 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis orientalis HCCB10007.;"
putative mobilization relaxase component
SCNpilot_cont_750_bf_scaffold_529_46
unknown

Not on your lists

comp(38428..38721)
DNA (294bp) protein (98aa)

This feature has no annotations

SCNpilot_cont_750_bf_scaffold_529_47
Streptomyces sp. Mg1, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

39077..40465
DNA (1389bp) protein (463aa)
Putative uncharacterized protein n=1 Tax=Streptomyces sp. Mg1 RepID=B4VGH6_9ACTO
Putative uncharacterized protein {ECO:0000313|EMBL:EDX27063.1}; TaxID=465541 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. Mg1.;"
putative transcriptional regulator
SCNpilot_cont_750_bf_scaffold_529_48
Kutzneria sp. 744, Kutzneria, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

40991..42463
DNA (1473bp) protein (491aa)
hypothetical protein n=1 Tax=Amycolatopsis balhimycina RepID=UPI00035DA86B rbh
LigA protein {ECO:0000313|EMBL:EWM17236.1}; TaxID=345341 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kutzneria.;" source="Kutzneria sp. 744.;"
hypothetical protein
SCNpilot_cont_750_bf_scaffold_529_49
Kribbella flavida, Kribbella, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(42788..45784)
DNA (2997bp) protein (999aa)
hypothetical protein n=1 Tax=Nocardiopsis valliformis RepID=UPI0003748B2E rbh
hypothetical protein rbh
Type III restriction protein res subunit {ECO:0000313|EMBL:ADB32397.1}; TaxID=479435 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Kribbella.;" source="Kribbella flavida (strain DSM 17836 / JCM 10339 / NBRC 14399).;"
SCNpilot_cont_750_bf_scaffold_529_50
Streptosporangium roseum, Streptosporangium, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

46158..46652
DNA (495bp) protein (165aa)
hypothetical protein n=1 Tax=Salinispora pacifica RepID=UPI0003760E39
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACZ89735.1}; TaxID=479432 species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Streptosporangium.;" source="Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 /; NI 9100).;"
SCNpilot_cont_750_bf_scaffold_529_51
Streptomyces ambofaciens, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

46649..47791
DNA (1143bp) protein (381aa)
hypothetical protein n=1 Tax=Salinispora arenicola RepID=UPI000363B3F5 rbh
Integrase; TaxID=1889 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces ambofaciens.;"
int; Integrase rbh
SCNpilot_cont_750_bf_scaffold_529_52
unknown

Not on your lists

48266..48379
DNA (114bp) protein (38aa)

This feature has no annotations

SCNpilot_cont_750_bf_scaffold_529_53
Streptomyces sp. SirexAA-E, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

48389..50602
DNA (2214bp) protein (738aa)
Uncharacterized protein n=1 Tax=Streptomyces sp. SirexAA-E RepID=G2N9P2_9ACTO rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:AEN07970.1}; TaxID=862751 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. (strain SirexAA-E / ActE).;"
SCNpilot_cont_750_bf_scaffold_529_54
unknown

Not on your lists

comp(51192..51689)
DNA (498bp) protein (166aa)

This feature has no annotations

Displaying items 31-54 of 54 in total

View Taxonomy