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SCNpilot_cont_750_bf_scaffold_285_14

Organism: SCNPILOT_CONT_300_BF_Pseudonocardia_72_23

near complete RP 51 / 55 MC: 1 BSCG 51 / 51 ASCG 14 / 38 MC: 1
Location: comp(14904..15692)

Top 3 Functional Annotations

Value Algorithm Source
Binding-protein-dependent transport systems inner membrane component n=1 Tax=Frankia sp. (strain EuI1c) RepID=E3IZL3_FRASU similarity UNIREF
DB: UNIREF100
  • Identity: 46.7
  • Coverage: 261.0
  • Bit_score: 224
  • Evalue 1.10e-55
binding-protein-dependent transport system inner membrane protein; K02053 putative spermidine/putrescine transport system permease protein similarity KEGG
DB: KEGG
  • Identity: 46.7
  • Coverage: 261.0
  • Bit_score: 224
  • Evalue 3.40e-56
Binding-protein-dependent transport systems inner membrane component {ECO:0000313|EMBL:ADP83931.1}; TaxID=298654 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. (strain EuI1c).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 46.7
  • Coverage: 261.0
  • Bit_score: 224
  • Evalue 1.50e-55

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Taxonomy

Frankia sp. EuI1c → Frankia → Frankiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 789
ATGACCCGCGGGCGCCGCTGGCGCGTCGTCGTCTTCACGATCGCGGCGATCTACTTCCTGGTGCCGCTGATCTCCGCAGGCGAGTTCAGCCTCCGCAAGCCCGCGGGCGGCTACGGGTTCGCGAACTACCTGGCCCTGGGCACCGACCCGGTGCTGCTCGGGTCGCTGCTGGTGTCGCTGCAGATCGCCGTACTCACCGCGGTGCTCGTGCTCGTGCTGGTGATCCCCACCGCGGTGTGGGTGCGGCTGCGGTTCCCCTCGGTGGCCGCGCTGCTGGAGACGGCCACGATCCTGCCGATCGTCGTGCCGCCCGTCGTCATGGCAGCGGGCATCGCGTTCGTGCAGGCCAACCTCGACGCCGAGCCGTTCCGGTCGCTGTTCGCCTCCTCGACCACCGCGCTCACGCCGTTCTACGTGGTGCTGGCCCTGCCGTTCGCCTACCGCGCGGTGGACAACGGGCTGGCCGCCATCCCCCTGCGCACGCTCGTCGAGGCGGCCCGCAACCTGGGCGCCGGGCTGCCGTCGGCGCTGCTGCGGGTGGTGCTGCCGGCCATCCGCAGCGCCGTGCTCGGCTCGGCGTTCCTGACGCTCGCGCTGGTGCTCGGCGAGGTCGTCATCGCGCGCATCCTGCTCTACACCGACACCTTCCCCGTGGTCGTCATCGACGTCGGGCGCAGCGCCGCCGGAGTCTCGGTGGCGTTGACGCTGGCCAGCCTCGTGCTCACCTGGGTGCTGCTGCTGCTCGTGTCGTACGTGGGTGGCCGCACGACGAGGAGAACTGACGCATGA
PROTEIN sequence
Length: 263
MTRGRRWRVVVFTIAAIYFLVPLISAGEFSLRKPAGGYGFANYLALGTDPVLLGSLLVSLQIAVLTAVLVLVLVIPTAVWVRLRFPSVAALLETATILPIVVPPVVMAAGIAFVQANLDAEPFRSLFASSTTALTPFYVVLALPFAYRAVDNGLAAIPLRTLVEAARNLGAGLPSALLRVVLPAIRSAVLGSAFLTLALVLGEVVIARILLYTDTFPVVVIDVGRSAAGVSVALTLASLVLTWVLLLLVSYVGGRTTRRTDA*