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SCNpilot_cont_750_bf_scaffold_510_1

Organism: SCNPILOT_CONT_300_BF_Pseudonocardia_72_23

near complete RP 51 / 55 MC: 1 BSCG 51 / 51 ASCG 14 / 38 MC: 1
Location: comp(2..2164)

Top 3 Functional Annotations

Value Algorithm Source
Rifamycin polyketide synthase n=1 Tax=Amycolatopsis vancoresmycina DSM 44592 RepID=R1IGY2_9PSEU similarity UNIREF
DB: UNIREF100
  • Identity: 47.5
  • Coverage: 749.0
  • Bit_score: 615
  • Evalue 6.00e-173
Rifamycin polyketide synthase {ECO:0000313|EMBL:EOD69729.1}; TaxID=1292037 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis vancoresmycina DSM 44592.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 47.5
  • Coverage: 749.0
  • Bit_score: 615
  • Evalue 8.40e-173
rifA; rifamycin polyketide synthase similarity KEGG
DB: KEGG
  • Identity: 47.1
  • Coverage: 739.0
  • Bit_score: 608
  • Evalue 2.30e-171

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Taxonomy

Amycolatopsis vancoresmycina → Amycolatopsis → Pseudonocardiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 2163
TTGCGGTCAGATCTCATCCAGCCCCTGCACGTTCTCGTTGCCCGGCACGCGACTGATCGCGGCGACGACGTCGCGTACTCCGACATCAACATCAAGGTGACGTGGGCGCAGCTGTGGGAGCGGTCGGGGCGGCTCGCTGGACACATGGCTGCGCTGGGTGTCCAGCGAGGTGATCGGGTGGTGATAGGCCTGCCCGAGCAGGTAACGACCATCGAGGTCTGGCTGGCGGTTCACCGCGTGTCTGCGATCGCGGTACCGGTTGATCCCCGCAGCACTACAGTCGAGTTGGGCCACATCGTGCATGACAGCGGCGCCTCCTGTGTGGTGGTCACGGGCGAGATGGCTGAGCGGCACGCCGGCTCGGCGGCCTTGCAAGGCCTGCTGCTCGTTGTCGGCCAGGTGACCGGAGCGGACAGCCCACATCTGCACGACGTTGACGTGTTCCTAGAGCAAGAGTCCGAGGTCGGTCCACGCGACGACCTGGGTCTGGACGACCCGGCTTTCATGATCTACACATCGGGTACATCAGGTCGGCCCAAGGGGGTCGTCTCGACGCAGCGCAGCTGCCTGTGGTCAGTGGCCGCGTGTTATGCGGCAGTCCTCGGGCTGGACACTGCGGACGTCGTGGTGTGGCCGCTTCCGCTGCAACACAGCTGGTCGCACGTGTTCTGCATCGTCGGCGTGATGGCGACTGGTGCGCAGTGCAGGCTCGTGCCTGGGATGGCGCCGGATGACGTCATCGCCGAGGTCGTCGAACACGGCGCCACTGTGATCGCCGGAGTGCCCACTCTATACAGCCGGATGCTAACGAGACTGCGCGAGCGCCCACAGGCAATGCCCTCGCTACGAATGTGCGTGATGGCCGGTGCGATTGGTCCCTCGACGCTCGGCGACGCCATCGCCGACGTAGTCGGATGCAAGCTCGTCAATCTCTACGCCAGTACGGAGACCAACGGTTCCATCGCGACCGAGCGACCCGGCGGGCCACGCGTGCCGGGCTCATGTGGGCAGCCAGTCCCCGGTGTGACGACGCGGATCGTCGAGCCCAGCTCGGGCCGGGACGTCGAGCCGGGCGAGGAGGGTGAGGTCTGGGTGTCGGGGCCCAATCTCATGCTCGGTTACCACGGTCTTCCGGACGCCACCGATCGCGTCTTGAGAGACGGCTTTTACCACACGGGCGACTTGGCGCGTCAGGACGAACAGGGCTTCCTGCACGTCAGTGGGCGACGCGACGATCTGATAATCCGGGGCGGGGACAACATTCATCCCGTCGAGGTGGAGAACGTGCTGCGGTCGGTGCCGGGGGTTGCAGACGCGGCCGTGGTAGGTCGTAGGGACGACGATCTCGGTCAAGTCCCCGTCGCGTTTCTAGTACCCGCTGATGCGCCCCAGCTCGACCTGGATGTGGTCGTCGAGGTGTGTCGGCGAGAGCTCGGCGCGGGGAAGGTGCCTGTGGCGTTCCGCGTCACCACTGACCTACCGCGCACGGCGTCCGGCAAGGTTCTGAGGCGCCACCTTGATCCTGCTCTGCCGACGCCGCCAGCCACAACCGGAGCCTCTTCCGGATGGGCCGCGGACGTGGTGCCACTTGCGGAGGAGAATCGATATGCCGATGAGCTCGACGAACGTGCACTTGCCGAGCTCGTCGAGCGGACCGTGGGCAACGTGCTCGGAGTGTCCCCGTCCCCGGCGATGGGCGCGGGCGTGTCCTTCCGTGATCGGGGCATCGACTCTCTGGGTGCTGTGCGGATCCGCGATGCTCTCGCCGTCGCTATCGGGTTGAGGCTGCCGGCCGGGATTGTCTTCGACCACCCCACACCGCAGCGTATGGCCATATATTTGCGAAAGCGGATGCGACAGCGAGGCATGCGCGACAACGTTGTGCAGACCCGGTCCGCGGGATCATCGAGTGAGCCGATCGCGATCGTCGGGATGGCGTGCCGTTATCCCGGCGGGATCGGTTGTCCGGAGGACCTATGGCAGGTGGCGCGTGCTGGTCGTGACGTGCTGGCTGGCTTTCCCTCCGACCGGGGCTGGACAGTCCCTCCCGACCTGCCGGCCCGCGGTGGGTTCCTGCACGATGTGGCCGGGTTCGACGCAGCGTTCTTCGGGATCAGTCCGCGGGAGGCTGTGGCGATGGATCCGCAGCAGCGCCTGTTGCTG
PROTEIN sequence
Length: 721
LRSDLIQPLHVLVARHATDRGDDVAYSDINIKVTWAQLWERSGRLAGHMAALGVQRGDRVVIGLPEQVTTIEVWLAVHRVSAIAVPVDPRSTTVELGHIVHDSGASCVVVTGEMAERHAGSAALQGLLLVVGQVTGADSPHLHDVDVFLEQESEVGPRDDLGLDDPAFMIYTSGTSGRPKGVVSTQRSCLWSVAACYAAVLGLDTADVVVWPLPLQHSWSHVFCIVGVMATGAQCRLVPGMAPDDVIAEVVEHGATVIAGVPTLYSRMLTRLRERPQAMPSLRMCVMAGAIGPSTLGDAIADVVGCKLVNLYASTETNGSIATERPGGPRVPGSCGQPVPGVTTRIVEPSSGRDVEPGEEGEVWVSGPNLMLGYHGLPDATDRVLRDGFYHTGDLARQDEQGFLHVSGRRDDLIIRGGDNIHPVEVENVLRSVPGVADAAVVGRRDDDLGQVPVAFLVPADAPQLDLDVVVEVCRRELGAGKVPVAFRVTTDLPRTASGKVLRRHLDPALPTPPATTGASSGWAADVVPLAEENRYADELDERALAELVERTVGNVLGVSPSPAMGAGVSFRDRGIDSLGAVRIRDALAVAIGLRLPAGIVFDHPTPQRMAIYLRKRMRQRGMRDNVVQTRSAGSSSEPIAIVGMACRYPGGIGCPEDLWQVARAGRDVLAGFPSDRGWTVPPDLPARGGFLHDVAGFDAAFFGISPREAVAMDPQQRLLL