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SCNpilot_cont_750_bf_scaffold_517_73

Organism: SCNPILOT_CONT_300_BF_Pseudonocardia_72_23

near complete RP 51 / 55 MC: 1 BSCG 51 / 51 ASCG 14 / 38 MC: 1
Location: 75818..76864

Top 3 Functional Annotations

Value Algorithm Source
sugar ABC transporter substrate-binding protein n=1 Tax=Amycolatopsis methanolica RepID=UPI00037B2F33 similarity UNIREF
DB: UNIREF100
  • Identity: 65.4
  • Coverage: 347.0
  • Bit_score: 456
  • Evalue 1.70e-125
  • rbh
Ribose ABC transporter, periplasmic ribose-binding protein RbsB {ECO:0000313|EMBL:EWC58778.1}; TaxID=909613 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Actinokineospora.;" source="Actinokineospora spheciospongiae.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 82.2
  • Coverage: 348.0
  • Bit_score: 563
  • Evalue 1.80e-157
periplasmic binding protein/LacI transcriptional regulator; K10439 ribose transport system substrate-binding protein similarity KEGG
DB: KEGG
  • Identity: 66.4
  • Coverage: 348.0
  • Bit_score: 455
  • Evalue 1.20e-125
  • rbh

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Taxonomy

Actinokineospora spheciospongiae → Actinokineospora → Pseudonocardiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1047
ATGTCCGATCTTCAGCGCCGCCGGTTCCTGATCGGGGCCGGGGTCGTCGGTGCCACCGTCGCGCTGTCGGCCTGCACCAGCAACGCCGCCCCCGGCGCGTCCGGGGCGAACGTGGCCGCCGCGGCGGGCGACAACGCCGCGGCCGGCGCCGCCGTCACGATCGGGTTCTCCGCGCCGGCGGCCGACCACGGCTGGATCGCGGCGATCGCGAACAACGCGGCCGCCCAGGCCAAGCAGTACCCGGACGTCACGTTCGAGGCCGTGAACCCGACCAACGACGTCACGCAGCAGATCGCCGCCGTCCAGACGCTGATCAACAAGAAGGTCAGCGCGCTGGTGATCCTGCCCAACGACGGCAGCCAGCTCACCTCCGTGGGCCGTGCGGCCATGCAGGCGGGCATCCCGGTGATCAACCTCGACCGGGTCTTCGACACGCCGCTGGCCTACCGGACCTGGATCGGCGGCGACAACTACGGCATGGGCGTCAGCGCCGGCACGTACATCGGTGAGCAGCTGAAGGCCAGGGGAGTGACCAACCCGGTGATCGGGGAGATCGCGGGCATCGACAACCTGCCGCTGACCCAGTCGCGCAGCAAGGGCTTCTCCGACGCGCTGGCGTCGTTCGGGTACAAGGTCGGGCCGCGGCAGGCGGCCGACTTCACCGCGCAGGGCGGCCAGCGCGTCACCGCGAACCTGATGCAGGCCGCCCCGAAGCTCGACGCACTGTGGAACCACGACGACGACCAGGGGATCGGTGTGCTGGCCGCGATCAAGCAGGCGAACCGCAGCGAGTTCTTCATGGTCGGCGGCGCCGGCTCGGCCAACGCCATGCGCGACATCAAGGCCGACAACACCGTGCTCAAGGCCACCGTCACCTACGCCCCCACGATGGCGTCCTCGGCGGTCTCGCTGGCGCGGCTCGTGGCGCAGAACCGCGGGATGGGCGACCTCGTCGAGAAGGAGGTGCCGACCTCCATCACGCTCGCCTCGGCCACCGTCACGAAGGAGAACGTCGACACCTACCTGCCGTTGGGCTTCGAATCATGA
PROTEIN sequence
Length: 349
MSDLQRRRFLIGAGVVGATVALSACTSNAAPGASGANVAAAAGDNAAAGAAVTIGFSAPAADHGWIAAIANNAAAQAKQYPDVTFEAVNPTNDVTQQIAAVQTLINKKVSALVILPNDGSQLTSVGRAAMQAGIPVINLDRVFDTPLAYRTWIGGDNYGMGVSAGTYIGEQLKARGVTNPVIGEIAGIDNLPLTQSRSKGFSDALASFGYKVGPRQAADFTAQGGQRVTANLMQAAPKLDALWNHDDDQGIGVLAAIKQANRSEFFMVGGAGSANAMRDIKADNTVLKATVTYAPTMASSAVSLARLVAQNRGMGDLVEKEVPTSITLASATVTKENVDTYLPLGFES*