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SCNpilot_cont_750_bf_scaffold_712_3

Organism: SCNPILOT_CONT_300_BF_Pseudonocardia_72_23

near complete RP 51 / 55 MC: 1 BSCG 51 / 51 ASCG 14 / 38 MC: 1
Location: comp(863..2062)

Top 3 Functional Annotations

Value Algorithm Source
Putative RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F7M6_CONWI similarity UNIREF
DB: UNIREF100
  • Identity: 78.1
  • Coverage: 397.0
  • Bit_score: 601
  • Evalue 8.50e-169
  • rbh
ECF subfamily RNA polymerase sigma-24 subunit; K03088 RNA polymerase sigma-70 factor, ECF subfamily similarity KEGG
DB: KEGG
  • Identity: 78.1
  • Coverage: 397.0
  • Bit_score: 601
  • Evalue 2.70e-169
  • rbh
Putative RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:ADB50888.1}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 78.1
  • Coverage: 397.0
  • Bit_score: 601
  • Evalue 1.20e-168

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Taxonomy

Conexibacter woesei → Conexibacter → Solirubrobacterales → Thermoleophilia → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1200
ATGGACGTCGCCCGCGTCTTCCGGGCCGAGCACGGGCGGGCGGTGGCGGTGCTCGTGCGGGCCCTCGGCGACATCGACCTCGCCGAGGACGCCGTGCAGGAGGCCTTCGTCGCGGCCGCGGCCCGCTGGCCGTGCGAGGGCCTGCCGCCCAGCCCCGCCGGCTGGATCATCACCACCGCCCGCAACCGGGCGATCGACCGGCTGCGCCGCGAGGCCACCCGTGACGACCGCCACGCGCAGGCCGCGCTGCTGCACGCGCGCGACGTGCCCGTCGAGGAGGAGCCCGTGCGCGACGACCGCCTGCGCCTGATCTTCACGTGCTGCCACCCGGCGCTCGCGCCCGCTGCGCGCGTCGCCCTCACACTGCGGCTGCTCGGCGGGCTGTCCACACCGGAGATCGCCCGCGCCTTCCTCGTGCCCGAGCCGACGATGGCGCAGCGGATCGTGCGGGCCAAGGGCAAGATCCGCGACGCCCGCATTCCCTACCGGGTGCCCACCGAGGCCGAGCTGCCGGACCGCCTGGCCGCGGTGCTCGCCGTCGTCTACCTGGTCTTCAACGAGGGCTACACGGCGAGCTCGGGCGACCGGCTGGTCCGGGCGGAGCTGTGCGCCGAGGCCGTCCGGCTCGGGCGGCTGCTCGCCGAGCTGATGCCCGACGAGCCCGAGGTCCTCGGCCTGCTGGCGCTGATGCTGCTGATCGAGTCGCGTCGCCCCGCCCGCACCACTCCCGAGGGCGCGCTCGTGCTGCTCGCCGACCAGGACCGGTCCCGCTGGGACGCCCGGCTCGTCGCGGAGGGGCAGGCGCTGGTGCGGGAGTGCGTGCGGCGCAACCGGCCCGGGCCCTACCAGATCCAGGCCGCGATCAACGCCGTCCACAGCGACGGGCCCGGTGCGGCGGCCACGGACTGGCGCCAGATCCTCGCCCTCTACGACCAGCTCCTCGCAGTGGCCCCGAGCCCGGTGGTGGCGCTGCACCGGGCCGTCGCGGTGGCCGAGGTCGACGGACCGCAGGTGGCGCTCGCCGTGGTCGACGCGCTGCCCCCGGTGGCCGGCCACCTCCGGCACGCCGTGCGCGCGGACCTGCTGCGGCGGCTCGACCGGGCCGCCGAGGCCGTCGCCGCCTACGACGCCGCCATCGAGCTCACCGGCAACGAGGTGGAGCGGGCGTTCCTCCGGGCCCGGCGTTCCCCGTTGGTGTGA
PROTEIN sequence
Length: 400
MDVARVFRAEHGRAVAVLVRALGDIDLAEDAVQEAFVAAAARWPCEGLPPSPAGWIITTARNRAIDRLRREATRDDRHAQAALLHARDVPVEEEPVRDDRLRLIFTCCHPALAPAARVALTLRLLGGLSTPEIARAFLVPEPTMAQRIVRAKGKIRDARIPYRVPTEAELPDRLAAVLAVVYLVFNEGYTASSGDRLVRAELCAEAVRLGRLLAELMPDEPEVLGLLALMLLIESRRPARTTPEGALVLLADQDRSRWDARLVAEGQALVRECVRRNRPGPYQIQAAINAVHSDGPGAAATDWRQILALYDQLLAVAPSPVVALHRAVAVAEVDGPQVALAVVDALPPVAGHLRHAVRADLLRRLDRAAEAVAAYDAAIELTGNEVERAFLRARRSPLV*