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SCNpilot_cont_750_bf_scaffold_712_7

Organism: SCNPILOT_CONT_300_BF_Pseudonocardia_72_23

near complete RP 51 / 55 MC: 1 BSCG 51 / 51 ASCG 14 / 38 MC: 1
Location: 3405..3683

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator WhiB n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CW74_PSEUX similarity UNIREF
DB: UNIREF100
  • Identity: 66.7
  • Coverage: 84.0
  • Bit_score: 135
  • Evalue 2.40e-29
transcription factor WhiB similarity KEGG
DB: KEGG
  • Identity: 66.7
  • Coverage: 84.0
  • Bit_score: 135
  • Evalue 7.40e-30
Transcriptional regulator WhiB {ECO:0000256|HAMAP-Rule:MF_01479}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 66.7
  • Coverage: 84.0
  • Bit_score: 135
  • Evalue 3.30e-29

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Taxonomy

Pseudonocardia dioxanivorans → Pseudonocardia → Pseudonocardiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 279
ATGACCGACGTCGGGCGCCTCCCGGCCCCGATCACCGACAACTGGGACTGGCAGATGCGCGGCGCCTGCCGCGATCTCGACAGCGCGGTCTTCTTCCACCCCACCCGCGAACGCGGCCCGTCGCGGCGGGCGCGGGTGCGCCGCGCCAAGGAGATCTGCGAGACCTGCCCGGTCATCGAGGAGTGCCGTCGCTACTCGCTCGCCACCCGGGAGCCCTACGGGGTGTGGGGCGGGCTCTCGGAGGCCGAACGCTCGGCCCTCGTGAGCTGGTCGTCGTGA
PROTEIN sequence
Length: 93
MTDVGRLPAPITDNWDWQMRGACRDLDSAVFFHPTRERGPSRRARVRRAKEICETCPVIEECRRYSLATREPYGVWGGLSEAERSALVSWSS*