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SCNpilot_cont_750_bf_scaffold_535_59

Organism: SCNPILOT_CONT_300_BF_Pseudonocardia_72_23

near complete RP 51 / 55 MC: 1 BSCG 51 / 51 ASCG 14 / 38 MC: 1
Location: comp(48238..48666)

Top 3 Functional Annotations

Value Algorithm Source
sporulation protein SsgA n=1 Tax=Pseudonocardia sp. P1 RepID=UPI0001FFDC88 similarity UNIREF
DB: UNIREF100
  • Identity: 67.6
  • Coverage: 142.0
  • Bit_score: 194
  • Evalue 8.60e-47
Regulator {ECO:0000313|EMBL:AIJ22930.1}; TaxID=1068978 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis methanolica 239.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 55.4
  • Coverage: 139.0
  • Bit_score: 153
  • Evalue 2.30e-34
sporulation and cell division protein SsgA similarity KEGG
DB: KEGG
  • Identity: 54.6
  • Coverage: 141.0
  • Bit_score: 151
  • Evalue 2.60e-34

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Taxonomy

Amycolatopsis methanolica → Amycolatopsis → Pseudonocardiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 429
ATGCGCGACGAGCACACGGTCATCTGCTCACCGGCGGTGTTCGAGTTGATCGCCCATGACGCGCCGCCCGTGGCGGTGAAGGTCGACTTGAGCTACCACAGCCGCGATCCCTACGCGGTGCAGGCATCCTTCCTGACCGGGAACGGTACGGCGGTCGACTGGGTGTTCGCCCGGGACCTCCTCCACGACGGCCTCGTCGCCGACTCCGGGACGGGTGACGTCCGGGTGCTGCCGATGCCGAGCAACCCGAACAAGGTACAGCTGGAGCTGTCCTCGCCGTCCGGGCACGCGGTCTTCACGACCTGCGCCCAGACGCTCGGCGACTTCCTCTACCGCACCTACGAGGCCGTCCCGCCGAAGACCGAGTACGACTGGCTCGACTTCGACATGGCGCTCTCGGACCTCCTGAACGACCCTGCGCGCGACTAG
PROTEIN sequence
Length: 143
MRDEHTVICSPAVFELIAHDAPPVAVKVDLSYHSRDPYAVQASFLTGNGTAVDWVFARDLLHDGLVADSGTGDVRVLPMPSNPNKVQLELSSPSGHAVFTTCAQTLGDFLYRTYEAVPPKTEYDWLDFDMALSDLLNDPARD*