ggKbase home page

SCNpilot_cont_750_bf_scaffold_546_28

Organism: SCNPILOT_CONT_300_BF_Pseudonocardia_72_23

near complete RP 51 / 55 MC: 1 BSCG 51 / 51 ASCG 14 / 38 MC: 1
Location: comp(35186..35566)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Amycolatopsis nigrescens RepID=UPI00035C7D86 similarity UNIREF
DB: UNIREF100
  • Identity: 57.5
  • Coverage: 120.0
  • Bit_score: 134
  • Evalue 7.20e-29
NAD(P)-dependent steroid dehydrogenase {ECO:0000313|EMBL:ERK90886.1}; TaxID=1297742 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Myxococcus.;" source="Myxococcus sp. (contaminant ex DSM 436).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 45.8
  • Coverage: 120.0
  • Bit_score: 110
  • Evalue 2.00e-21
NAD dependent epimerase/dehydratase family protein similarity KEGG
DB: KEGG
  • Identity: 46.7
  • Coverage: 120.0
  • Bit_score: 109
  • Evalue 5.90e-22

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Myxococcus sp. (contaminant ex DSM 436) → Myxococcus → Myxococcales → Deltaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 381
ATGGAGACCACCCACGTGGCCGACGTGGTCGAGGCGCTGGTGCTCGCCGCGAAGCGGGGGCGCGGCGGCCACGCCTACTTCGTCACCGACGGCGAACCGATTCCGTTCCGCGAGTTCGTCACCCGCATCCTCGCCACCGCCGACACGACGCCACCAGCACGGACCCTGCCGCGCTCGGTCGCCGACCGCATCACCGCGGCAGGCGAATGGGCGTGGCGCACCTTCCCGCTCCCGGGCCGACCACCGCTGACGCGGATGGCGCTGTGGCTGTCCTCCCTGGAATGCACGATCGACATCACCCGAGCCCGGACCGAACTGGACTACTCCCCGATCGTCAACCACAACAACGGACTTACCGCACTCCACCACGCCACCCGTTGA
PROTEIN sequence
Length: 127
METTHVADVVEALVLAAKRGRGGHAYFVTDGEPIPFREFVTRILATADTTPPARTLPRSVADRITAAGEWAWRTFPLPGRPPLTRMALWLSSLECTIDITRARTELDYSPIVNHNNGLTALHHATR*