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SCNpilot_cont_750_bf_scaffold_1340_9

Organism: SCNPILOT_CONT_300_BF_Pseudonocardia_72_23

near complete RP 51 / 55 MC: 1 BSCG 51 / 51 ASCG 14 / 38 MC: 1
Location: 4945..5133

Top 3 Functional Annotations

Value Algorithm Source
transcriptional regulator n=1 Tax=Pseudonocardia sp. P1 RepID=UPI0001FFEF56 similarity UNIREF
DB: UNIREF100
  • Identity: 50.0
  • Coverage: 62.0
  • Bit_score: 69
  • Evalue 1.10e-09
excisionase family DNA binding domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 60.0
  • Coverage: 55.0
  • Bit_score: 69
  • Evalue 4.40e-10
DNA binding domain protein, excisionase family {ECO:0000313|EMBL:ACV76894.1}; TaxID=479431 species="Bacteria; Actinobacteria; Nakamurellales; Nakamurellaceae; Nakamurella.;" source="Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 /; Y-104) (Microsphaera multipartita).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 60.0
  • Coverage: 55.0
  • Bit_score: 69
  • Evalue 2.00e-09

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Taxonomy

Nakamurella multipartita → Nakamurella → Nakamurellales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 189
ATGGAACGCCTGTTGCTCACGGCGGAGGAAGTCGCGGAAGCGCTCCACATCGGACGGACCCGCGTGTACGCACTGATCGCCGCCAAGGAGATCACCTCGGTGAAGATCGGCGGCCTGCGCCGCATCCCGGTCGACGCCGTGCGGGAGTACGCCGCTCACCTGGTCCAACTCGAACAGGAGGCGTCCTGA
PROTEIN sequence
Length: 63
MERLLLTAEEVAEALHIGRTRVYALIAAKEITSVKIGGLRRIPVDAVREYAAHLVQLEQEAS*