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SCNpilot_cont_750_bf_scaffold_519

Search features with annotation key words

Displaying items 61-90 of 248 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_750_bf_scaffold_519_61
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

57596..58225
DNA (630bp) protein (210aa)
Prepilin-type N-terminal cleavage/methylation domain-containing protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WTR7_9GAMM
prepilin-type N-terminal cleavage/methylation domain-containing protein
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
SCNpilot_cont_750_bf_scaffold_519_62
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

58222..58743
DNA (522bp) protein (174aa)
Type IV pilus modification protein PilV n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W5Y5_9GAMM
Type IV pilus modification protein PilV {ECO:0000313|EMBL:EIL94876.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
type IV pilus modification protein PilV
SCNpilot_cont_750_bf_scaffold_519_63
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

58740..59768
DNA (1029bp) protein (343aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W5Y6_9GAMM rbh
Uncharacterized protein {ECO:0000313|EMBL:EIL94877.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
prepilin-type N-terminal cleavage/methylation domain-containing protein rbh
SCNpilot_cont_750_bf_scaffold_519_64
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

59770..60369
DNA (600bp) protein (200aa)
Putative Tfp pilus assembly protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W5Y7_9GAMM
Tfp pilus assembly protein PilX
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
SCNpilot_cont_750_bf_scaffold_519_65
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

60441..64358
DNA (3918bp) protein (1306aa)
Putative type 4 fimbrial biogenesis protein PilY1 n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W5Y8_9GAMM rbh
Putative type 4 fimbrial biogenesis protein PilY1 {ECO:0000313|EMBL:EIL94879.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
Tfp pilus assembly protein, tip-associated adhesin PilY1 rbh
SCNpilot_cont_750_bf_scaffold_519_66
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

64369..64839
DNA (471bp) protein (157aa)
PilE protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WM67_9GAMM
PilE protein {ECO:0000313|EMBL:EIM00559.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
prepilin-type N-terminal cleavage/methylation domain-containing protein
SCNpilot_cont_750_bf_scaffold_519_67
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(64847..66805)
DNA (1959bp) protein (653aa)
RecBCD enzyme subunit RecD {ECO:0000256|HAMAP-Rule:MF_01487}; EC=3.1.11.5 {ECO:0000256|HAMAP-Rule:MF_01487};; Exonuclease V subunit RecD {ECO:0000256|HAMAP-Rule:MF_01487}; Helicase/nuclease RecBCD subunit RecD {ECO:0000256|HAMAP-Rule:MF_01487}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
Exodeoxyribonuclease V subunit alpha n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VME0_9GAMM
recD; exodeoxyribonuclease V, alpha subunit rbh
SCNpilot_cont_750_bf_scaffold_519_68
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(66795..70442)
DNA (3648bp) protein (1216aa)
RecBCD enzyme subunit RecB {ECO:0000256|HAMAP-Rule:MF_01485}; EC=3.1.11.5 {ECO:0000256|HAMAP-Rule:MF_01485};; Exonuclease V subunit RecB {ECO:0000256|HAMAP-Rule:MF_01485}; Helicase/nuclease RecBCD subunit RecB {ECO:0000256|HAMAP-Rule:MF_01485}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
Exodeoxyribonuclease V subunit beta n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VME1_9GAMM
exodeoxyribonuclease V subunit beta
SCNpilot_cont_750_bf_scaffold_519_69
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(70439..73930)
DNA (3492bp) protein (1164aa)
RecBCD enzyme subunit RecC {ECO:0000256|HAMAP-Rule:MF_01486}; EC=3.1.11.5 {ECO:0000256|HAMAP-Rule:MF_01486};; Exonuclease V subunit RecC {ECO:0000256|HAMAP-Rule:MF_01486}; Helicase/nuclease RecBCD subunit RecC {ECO:0000256|HAMAP-Rule:MF_01486}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
recC; exodeoxyribonuclease V subunit gamma; K03583 exodeoxyribonuclease V gamma subunit [EC:3.1.11.5]
Exodeoxyribonuclease V subunit gamma n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VME2_9GAMM
SCNpilot_cont_750_bf_scaffold_519_70
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(74088..74465)
DNA (378bp) protein (126aa)
Lipoprotein n=1 Tax=Rhodanobacter sp. 115 RepID=I4WBJ6_9GAMM
Lipoprotein {ECO:0000313|EMBL:EIL96837.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
lipoprotein
SCNpilot_cont_750_bf_scaffold_519_71
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(74599..74934)
DNA (336bp) protein (112aa)
Putative signal peptide protein n=1 Tax=Rhodanobacter sp. 115 RepID=I4WBJ7_9GAMM
Putative signal peptide protein {ECO:0000313|EMBL:EIL96838.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
hypothetical protein
SCNpilot_cont_750_bf_scaffold_519_72
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(75043..75876)
DNA (834bp) protein (278aa)
Peptidase M48 Ste24p n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WDQ0_9GAMM
Peptidase M48 Ste24p {ECO:0000313|EMBL:EIL97591.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
Peptidase family M48
SCNpilot_cont_750_bf_scaffold_519_73
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

75942..76547
DNA (606bp) protein (202aa)
Transcriptional regulator, TetR family protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WDP9_9GAMM
Transcriptional regulator, TetR family protein {ECO:0000313|EMBL:EIL97590.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
transcriptional regulator
SCNpilot_cont_750_bf_scaffold_519_74
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

76559..77476
DNA (918bp) protein (306aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W4H7_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL94368.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
lysophospholipase
SCNpilot_cont_750_bf_scaffold_519_75
unknown

Not on your lists

77625..77846
DNA (222bp) protein (74aa)

This feature has no annotations

SCNpilot_cont_750_bf_scaffold_519_76
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(77895..78737)
DNA (843bp) protein (281aa)
TonB family protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WMN0_9GAMM rbh
TonB family protein {ECO:0000313|EMBL:EIM00722.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
outer membrane transport energization protein TonB
SCNpilot_cont_750_bf_scaffold_519_77
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

79056..82694
DNA (3639bp) protein (1213aa)
methylmalonyl-CoA mutase n=1 Tax=Dyella ginsengisoli RepID=UPI00034847C4 rbh
Methylmalonyl-CoA mutase, N-terminal domain/subunit {ECO:0000313|EMBL:AGG89640.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
methylmalonyl-CoA mutase, N-terminal domain/subunit rbh
SCNpilot_cont_750_bf_scaffold_519_78
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

82766..82975
DNA (210bp) protein (70aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=M4NFK9_9GAMM
protein of unknown function (DUF1814)
Uncharacterized protein {ECO:0000313|EMBL:AGG89639.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
SCNpilot_cont_750_bf_scaffold_519_79
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

82938..83156
DNA (219bp) protein (73aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=M4NIY6_9GAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGG89638.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
SCNpilot_cont_750_bf_scaffold_519_80
Mesorhizobium sp. LNJC399B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

83782..84813
DNA (1032bp) protein (344aa)
hypothetical protein n=1 Tax=Comamonas sp. B-9 RepID=UPI0003958DF0
Uncharacterized protein {ECO:0000313|EMBL:ESY03815.1}; TaxID=1287277 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNJC399B00.;"
hypothetical protein
SCNpilot_cont_750_bf_scaffold_519_81
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(85214..86230)
DNA (1017bp) protein (339aa)
Alpha/beta hydrolase n=1 Tax=Rhodanobacter sp. 115 RepID=I4WVJ0_9GAMM rbh
Alpha/beta hydrolase {ECO:0000313|EMBL:EIM03482.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
putative hydrolase or acyltransferase of alpha/beta superfamily
SCNpilot_cont_750_bf_scaffold_519_82
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(86797..87060)
DNA (264bp) protein (88aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VX25_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL91766.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
hypothetical protein
SCNpilot_cont_750_bf_scaffold_519_83
Lysobacter concretionis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(87057..88355)
DNA (1299bp) protein (433aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VX26_9GAMM rbh
Membrane protein {ECO:0000313|EMBL:KGM51840.1}; TaxID=1122185 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter concretionis Ko07 = DSM 16239.;"
hypothetical protein rbh
SCNpilot_cont_750_bf_scaffold_519_84
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(88665..89816)
DNA (1152bp) protein (384aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VX27_9GAMM rbh
Uncharacterized protein {ECO:0000313|EMBL:EIL91768.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
hypothetical protein rbh
SCNpilot_cont_750_bf_scaffold_519_85
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(89960..90748)
DNA (789bp) protein (263aa)
Uncharacterized protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WBE7_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL96788.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
hypothetical protein
SCNpilot_cont_750_bf_scaffold_519_86
Frateuria aurantia, Frateuria, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

90865..91377
DNA (513bp) protein (171aa)
thermoresistant glucokinase family carbohydrate kinase; K00851 gluconokinase [EC:2.7.1.12]
hypothetical protein n=1 Tax=Dyella ginsengisoli RepID=UPI0003466CE7
Carbohydrate kinase, thermoresistant glucokinase family {ECO:0000313|EMBL:AFC87419.1}; TaxID=767434 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Frateuria.;" source="Frateuria aurantia (strain ATCC 33424 / DSM 6220 / NBRC 3245 / NCIMB; 13370) (Acetobacter aurantius).;"
SCNpilot_cont_750_bf_scaffold_519_87
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

91507..91851
DNA (345bp) protein (115aa)
aminoacrylate peracid reductase n=1 Tax=Rudaea cellulosilytica RepID=UPI000374998D
Endoribonuclease L-PSP {ECO:0000313|EMBL:EIL90642.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
putative translation initiation inhibitor, yjgF family
SCNpilot_cont_750_bf_scaffold_519_88
Luteibacter yeojuensis, Luteibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(91952..94600)
DNA (2649bp) protein (883aa)
Putative alpha-glucosidase, glycosylhydrolase n=1 Tax=Bacteroides fragilis (strain ATCC 25285 / NCTC 9343) RepID=Q5LG23_BACFN rbh
Uncharacterized protein {ECO:0000313|EMBL:KJV36366.1}; TaxID=345309 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Luteibacter.;" source="Luteibacter yeojuensis.;"
alpha-glucosidase rbh
SCNpilot_cont_750_bf_scaffold_519_89
Pseudoxanthomonas suwonensis, Pseudoxanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

94815..95528
DNA (714bp) protein (238aa)
Uncharacterized protein {ECO:0000313|EMBL:AKC87086.1}; TaxID=314722 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Pseudoxanthomonas.;" source="Pseudoxanthomonas suwonensis.;"
id=2608851 bin=GWF1_Xanthomonadales_69_6 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF1_Xanthomonadales_69_6 organism_group=Gammaproteobacteria
SCNpilot_cont_750_bf_scaffold_519_90
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(95574..96239)
DNA (666bp) protein (222aa)
DSBA oxidoreductase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VTS0_9GAMM rbh
DSBA oxidoreductase {ECO:0000313|EMBL:EIL90611.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
putative dithiol-disulfide isomerase involved in polyketide biosynthesis rbh
Displaying items 61-90 of 248 in total

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