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SCNpilot_cont_750_bf_scaffold_519

Search features with annotation key words

Displaying items 211-240 of 248 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_750_bf_scaffold_519_211
Nitrosococcus oceani, Nitrosococcus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

224974..225285
DNA (312bp) protein (104aa)
Transcriptional regulator, XRE family n=2 Tax=Nitrosococcus oceani RepID=Q3JED3_NITOC
XRE family transcriptional regulator; K07726 putative transcriptional regulator
XRE family transcriptional regulator {ECO:0000313|EMBL:KFI20767.1}; TaxID=314279 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Nitrosococcus.;" source="Nitrosococcus oceani C-27.;"
SCNpilot_cont_750_bf_scaffold_519_212
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

225407..226294
DNA (888bp) protein (296aa)
Fimbrial protein (Pilin) n=1 Tax=Rhodanobacter sp. 115 RepID=I4WGG3_9GAMM
Fimbrial protein (Pilin) {ECO:0000313|EMBL:EIL98554.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
SCNpilot_cont_750_bf_scaffold_519_213
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

226481..226732
DNA (252bp) protein (84aa)
SpoVT/AbrB domain-containing protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WIT2_9GAMM
SpoVT/AbrB domain-containing protein {ECO:0000313|EMBL:EIL99373.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
SCNpilot_cont_750_bf_scaffold_519_214
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

226729..227076
DNA (348bp) protein (116aa)
Transcriptional modulator of MazE/toxin, MazF n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WIT1_9GAMM
Transcriptional modulator of MazE/toxin, MazF {ECO:0000313|EMBL:EIL99372.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
transcriptional modulator of MazF
SCNpilot_cont_750_bf_scaffold_519_215
Dyella japonica, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(227106..227660)
DNA (555bp) protein (185aa)
hypothetical protein n=1 Tax=Dyella japonica RepID=UPI0002ED1B68 rbh
Uncharacterized protein {ECO:0000313|EMBL:AIF46021.1}; TaxID=1217721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella japonica A8.;"
hypothetical protein
SCNpilot_cont_750_bf_scaffold_519_216
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

227808..228944
DNA (1137bp) protein (379aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VWD1_9GAMM rbh
Uncharacterized protein {ECO:0000313|EMBL:EIL91522.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
hypothetical protein
SCNpilot_cont_750_bf_scaffold_519_217
unknown

Not on your lists

comp(228980..229081)
DNA (102bp) protein (34aa)

This feature has no annotations

SCNpilot_cont_750_bf_scaffold_519_218
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(229247..229900)
DNA (654bp) protein (218aa)
Glutathione S-transferase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WPE0_9GAMM rbh
glutathione S-transferase rbh
Glutathione S-transferase {ECO:0000313|EMBL:EIM01332.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
SCNpilot_cont_750_bf_scaffold_519_219
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(230070..230549)
DNA (480bp) protein (160aa)
3-demethylubiquinone-9 3-methyltransferase n=1 Tax=Rhodanobacter denitrificans RepID=I4WS35_9GAMM rbh
3-demethylubiquinone-9 3-methyltransferase {ECO:0000313|EMBL:EIM01333.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
hypothetical protein
SCNpilot_cont_750_bf_scaffold_519_220
Lysobacter capsici, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(230609..231052)
DNA (444bp) protein (148aa)
activator of HSP90 ATPase n=1 Tax=Rudaea cellulosilytica RepID=UPI00036D5627
Activator of HSP90 ATPase {ECO:0000313|EMBL:EYR67290.1}; TaxID=1444315 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter capsici AZ78.;"
hypothetical protein
SCNpilot_cont_750_bf_scaffold_519_221
unknown

Not on your lists

231340..231429
DNA (90bp) protein (30aa)

This feature has no annotations

SCNpilot_cont_750_bf_scaffold_519_222
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

231769..232155
DNA (387bp) protein (129aa)
Oar protein n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VTT2_9GAMM
Oar protein {ECO:0000313|EMBL:EIL90623.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
hypothetical protein
SCNpilot_cont_750_bf_scaffold_519_223
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(232231..233058)
DNA (828bp) protein (276aa)
NAD-dependent protein deacetylase n=1 Tax=Rhodanobacter thiooxydans LCS2 PF3_9GAMM">RepID=I4WPF3_9GAMM rbh
NAD-dependent protein deacetylase, SIR2 family rbh
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
SCNpilot_cont_750_bf_scaffold_519_224
Xanthomonas translucens, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(233151..234212)
DNA (1062bp) protein (354aa)
Alcohol dehydrogenase (NADP+) {ECO:0000313|EMBL:CCP41873.1}; EC=1.1.1.2 {ECO:0000313|EMBL:CCP41873.1};; TaxID=1261556 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas translucens pv. translucens DSM 18974.;"
alcohol dehydrogenase, zinc-containing (EC:1.1.1.2); K13979 uncharacterized zinc-type alcohol dehydrogenase-like protein [EC:1.-.-.-] rbh
Alcohol dehydrogenase (NADP+) n=1 Tax=Xanthomonas translucens pv. translucens DSM 18974 RepID=L0T429_XANCT rbh
SCNpilot_cont_750_bf_scaffold_519_225
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

234398..235099
DNA (702bp) protein (234aa)
glutathione S-transferase domain-containing protein; K00799 glutathione S-transferase [EC:2.5.1.18]
Glutathione S-transferase n=1 Tax=Rhodanobacter thiooxydans LCS2 PF7_9GAMM">RepID=I4WPF7_9GAMM rbh
Glutathione S-transferase {ECO:0000313|EMBL:EIM01349.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
SCNpilot_cont_750_bf_scaffold_519_226
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

235172..236011
DNA (840bp) protein (280aa)
Uncharacterized protein n=1 Tax=Rhodanobacter sp. 115 RepID=I4VIW6_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:GAN44969.1}; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugakiibacter sediminis.;"
RNA methylase family protein
SCNpilot_cont_750_bf_scaffold_519_227
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

236103..236975
DNA (873bp) protein (291aa)
Beta-lactamase {ECO:0000256|RuleBase:RU361140, ECO:0000256|SAAS:SAAS00063099}; EC=3.5.2.6 {ECO:0000256|RuleBase:RU361140, ECO:0000256|SAAS:SAAS00063099};; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
beta-lactamase (EC:3.5.2.6)
Beta-lactamase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VWB8_9GAMM
SCNpilot_cont_750_bf_scaffold_519_228
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

237941..238474
DNA (534bp) protein (178aa)
oxidoreductase n=1 Tax=Pseudomonas aeruginosa RepID=UPI0002D3A19A
Uncharacterized protein {ECO:0000313|EMBL:EZP07059.1}; TaxID=1418240 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aeruginosa BWH054.;"
putative oxidoreductase, molybdopterin binding protein
SCNpilot_cont_750_bf_scaffold_519_229
Stenotrophomonas sp. SKA14, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

238583..240646
DNA (2064bp) protein (688aa)
Outer membrane receptor protein n=1 Tax=Stenotrophomonas sp. SKA14 RepID=B8L5S6_9GAMM rbh
Outer membrane receptor protein {ECO:0000313|EMBL:EED39802.1}; TaxID=391601 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. SKA14.;"
TonB-dependent receptor; K02014 iron complex outermembrane recepter protein rbh
SCNpilot_cont_750_bf_scaffold_519_230
Herminiimonas arsenicoxydans, Herminiimonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(240687..241484)
DNA (798bp) protein (266aa)
Molybdenum transport protein ModE n=1 Tax=Herminiimonas arsenicoxydans RepID=A4GAK4_HERAR
modE; transcriptional repressor for molybdate uptake; K02019 molybdate transport system regulatory protein
Molybdenum transport protein ModE {ECO:0000313|EMBL:CAL63541.1}; TaxID=204773 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Herminiimonas.;" source="Herminiimonas arsenicoxydans.;"
SCNpilot_cont_750_bf_scaffold_519_231
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(241541..243742)
DNA (2202bp) protein (734aa)
Penicillin acylase n=1 Tax=Rhodanobacter sp. 115 RepID=I4WJF6_9GAMM rbh
Penicillin acylase {ECO:0000313|EMBL:EIL99597.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
penicillin acylase rbh
SCNpilot_cont_750_bf_scaffold_519_232

Not on your lists

comp(243936..245156)
DNA (1221bp) protein (407aa)
hypothetical protein n=1 Tax=Dyella japonica RepID=UPI00036EE38D rbh
Lipoprotein {ECO:0000313|EMBL:EQD47596.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
hypothetical protein
SCNpilot_cont_750_bf_scaffold_519_233
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

245567..246343
DNA (777bp) protein (259aa)
Uncharacterized protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WPG5_9GAMM rbh
Uncharacterized protein {ECO:0000313|EMBL:EIM01357.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
pyrroloquinoline quinone (coenzyme PQQ) biosynthesis protein C rbh
SCNpilot_cont_750_bf_scaffold_519_234
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

246598..249303
DNA (2706bp) protein (902aa)
PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WPG6_9GAMM rbh
PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein {ECO:0000313|EMBL:EIM01358.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein rbh
SCNpilot_cont_750_bf_scaffold_519_235
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(249313..249990)
DNA (678bp) protein (226aa)
Peptide methionine sulfoxide reductase MsrA n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WRI0_9GAMM
methionine-S-sulfoxide reductase
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
SCNpilot_cont_750_bf_scaffold_519_236
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

250100..250918
DNA (819bp) protein (273aa)
Arylamine N-acetyltransferase n=1 Tax=Rhodanobacter sp. 115 RepID=I4WJF2_9GAMM rbh
Arylamine N-acetyltransferase {ECO:0000313|EMBL:EIL99593.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
arylamine N-acetyltransferase rbh
SCNpilot_cont_750_bf_scaffold_519_237
RIFOXYA1_FULL_Xanthomonadales_69_10_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(250934..251164)
DNA (231bp) protein (77aa)
Uncharacterized protein n=1 Tax=Cupriavidus pinatubonensis (strain JMP 134 / LMG 1197) RepID=Q474H2_CUPPJ
hypothetical protein; K14761 ribosome-associated protein
Tax=RIFOXYA1_FULL_Xanthomonadales_69_10_curated
SCNpilot_cont_750_bf_scaffold_519_238
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(251161..251595)
DNA (435bp) protein (145aa)
Uncharacterized protein n=1 Tax=Rhodanobacter sp. 115 RepID=I4WJF0_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL99591.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
Barstar (barnase inhibitor)
SCNpilot_cont_750_bf_scaffold_519_239
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(251592..252026)
DNA (435bp) protein (145aa)
Ribonuclease n=1 Tax=Rhodanobacter sp. 115 RepID=I4WJE9_9GAMM
Ribonuclease {ECO:0000313|EMBL:EIL99590.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
guanyl-specific ribonuclease Sa
SCNpilot_cont_750_bf_scaffold_519_240
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

252167..253711
DNA (1545bp) protein (515aa)
TGF-beta receptor type I/II extracellular region n=1 Tax=Rhodanobacter denitrificans RepID=I4WLJ8_9GAMM rbh
amino acid/peptide transporter (peptide:H symporter) rbh
Amino acid/peptide transporter (Peptide:H symporter) {ECO:0000313|EMBL:AGG88542.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
Displaying items 211-240 of 248 in total

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